RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA493828" and tax_phylum = "Promethearchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493828 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29445062 29445062 PRJNA493828_P_NODE_40470_length_239_cov_2.319277_g40051_i0 PRJNA493828 40470 239 2.319277 5.54307203 Promethearchaeia archaeon 3067280 Archaea Archaea 160 1.0699999999999999e-43   NR MFO7795213.1 3067280 g40051 i0 98.7 0.99163179916318 79 1 99.2 0 3 239 703 781 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 237 160 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;