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contig_metadata

11 rows where bioproject = "PRJNA493828" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3025702 3025702 PRJNA493828_P_NODE_35043_length_247_cov_0.885057_g34624_i0 PRJNA493828 35043 247 0.885057 2.18609079 Halteromyces radiatus 101107 Fungi Fungi 161 3.56e-35   NTclustered gi|2323717432|ref|XM_051549749.1| 101107 g34624 i0 84.663 63.4210526315789 163 23 66 2 2 163 976 1137 Halteromyces radiatus 60S ribosomal protein L2 (BX664DRAFT_81423), mRNA blastn 15665 161 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
3025954 3025954 PRJNA493828_P_NODE_8143_length_394_cov_3.376947_g7728_i0 PRJNA493828 8143 394 3.376947 13.30517118 Lobosporangium transversale 64571 Fungi Fungi 52.8 0.038   NTclustered gi|1227138508|ref|XM_022024107.1| 64571 g7728 i0 100 0.0710659898477157 28 0 7 0 61 88 340 313 Lobosporangium transversale GDP-fucose protein O-fucosyltransferase-domain-containing protein (BCR41DRAFT_353261), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
7484651 7484651 PRJNA493828_P_NODE_35226_length_247_cov_0.885057_g34807_i0 PRJNA493828 35226 247 0.885057 2.18609079 Lichtheimia 688353 Fungi Fungi 457 4.05e-124   NTclustered gi|267847070|gb|GQ342910.1| 42458 g34807 i0 100 99.8218623481781 247 0 100 0 1 247 262 16 Lichtheimia corymbifera culture-collection CBS:102.48 clone 4 28S large subunit ribosomal RNA gene, partial sequence blastn 24656 457 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
10678359 10678359 PRJNA493828_P_NODE_33649_length_249_cov_0.875000_g33230_i0 PRJNA493828 33649 249 0.875 2.17875 Mucor velutinosus 708070 Fungi Fungi 167 7.709999999999999e-37   NTclustered gi|2724893459|ref|XM_064827409.1| 708070 g33230 i0 79.184 7.05220883534137 245 47 98 4 7 249 527 285 Mucor velutinosus uncharacterized protein (ATC70_008155), partial mRNA blastn 1756 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
10678361 10678361 PRJNA493828_P_NODE_33969_length_248_cov_2.571429_g33550_i0 PRJNA493828 33969 248 2.571429 6.37714392 Mucor racemosus 4841 Fungi Fungi 457 4.07e-124   NTclustered gi|225134681|gb|FJ345353.1| 4841 g33550 i0 100 99.0766129032258 247 0 99 0 2 248 2580 2334 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24571 457 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
11309556 11309556 PRJNA493828_P_NODE_17889_length_297_cov_2.361607_g17470_i0 PRJNA493828 17889 297 2.361607 7.01397279 Fungi 4751 Fungi Fungi 529 1.0499999999999996e-145   NTclustered gi|1694443677|ref|NG_065498.1| 4841 g17470 i0 99.315 98.3131313131313 292 2 98 0 3 294 1114 823 Mucor racemosus NRRL 3640 18S rRNA gene, partial sequence; from TYPE material blastn 29199 529 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
15134612 15134612 PRJNA493828_P_NODE_30132_length_255_cov_94.170330_g29713_i0 PRJNA493828 30132 255 94.17033 240.1343415 Fungi 4751 Fungi Fungi 440 4.2299999999999984e-119   NTclustered gi|658131632|emb|HF968958.1| 4874 g29713 i0 99.585 139.658823529412 241 1 95 0 15 255 2231 1991 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 35613 440 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
20232879 20232879 PRJNA493828_P_NODE_21636_length_281_cov_18.480769_g21217_i0 PRJNA493828 21636 281 18.480769 51.93096089 Fungi 4751 Fungi Fungi 355 1.76e-93   NTclustered gi|658131632|emb|HF968958.1| 4874 g21217 i0 90.943 63.2989323843416 265 22 94 2 15 278 2256 1993 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 17787 355 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
26760258 26760258 PRJNA493828_P_NODE_33881_length_248_cov_3.400000_g33462_i0 PRJNA493828 33881 248 3.4 8.432 Lichtheimia ramosa 688394 Fungi Fungi 52.4 1.55e-5   NR CDS11844.1 688394 g33462 i0 61.3 0.375 31 12 37.5 0 248 156 250 280 CDS11844.1 hypothetical protein LRAMOSA11488 [Lichtheimia ramosa] diamond 93 52.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ramosa
29823972 29823972 PRJNA493828_P_NODE_19911_length_288_cov_1.218605_g19492_i0 PRJNA493828 19911 288 1.218605 3.5095824 Rhizophagus irregularis 588596 Fungi Fungi 118 5.35e-31   NR PKK70049.1 588596 g19492 i0 62.2 1.875 90 33 92.7 1 283 17 124 213 PKK70049.1 aspartyl aminopeptidase-like protein [Rhizophagus irregularis] diamond 540 118 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
30914148 30914148 PRJNA493828_P_NODE_32594_length_250_cov_1.711864_g32175_i0 PRJNA493828 32594 250 1.711864 4.27966 Rhizophagus 295919 Fungi Fungi 62.8 3.52e-9   NR GBC30566.2 747089 g32175 i0 65.9 1.584 44 15 52.8 0 118 249 434 477 GBC30566.2 enzymatic polyprotein, putative [Rhizophagus irregularis DAOM 181602=DAOM 197198] diamond 396 62.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;