RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493828", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493828 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13228723 13228723 PRJNA493828_P_NODE_42071_length_233_cov_2.700000_g41652_i0 PRJNA493828 42071 233 2.7 6.291 Chemarfal virus 260 3063286 Viruses Viruses 359 1.1e-94   NTclustered gi|2626079958|gb|OR270550.1| 3063286 g41652 i0 94.421 1 233 13 100 0 1 233 652 420 MAG: Chemarfal virus 260 isolate ML188 genomic sequence blastn 233 359 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 260
24700924 24700924 PRJNA493828_P_NODE_46920_length_205_cov_5.181818_g46501_i0 PRJNA493828 46920 205 5.181818 10.6227269 Chrocurosk virus 3129322 Viruses Viruses 207 3.61e-49   NTclustered gi|2717317280|gb|PP171770.1| 3129322 g46501 i0 87.027 615.326829268293 185 22 89 2 18 200 1662 1846 MAG: Chrocurosk virus isolate CC1A_k141_129357 genomic sequence blastn 126142 207 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Chrocurosk virus
30361710 30361710 PRJNA493828_P_NODE_39512_length_241_cov_1.630952_g39093_i0 PRJNA493828 39512 241 1.630952 3.93059432 Totiviridae sp. 1955172 Viruses Viruses 58.2 1.3e-7   NR WAK77450.1 1955172 g39093 i0 36.5 0.921161825726141 74 46 92.1 1 6 227 534 606 WAK77450.1 MAG: capsid protein [Totiviridae sp.] diamond 222 58.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;