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contig_metadata

30 rows where bioproject = "PRJNA493828" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5578146 5578146 PRJNA493828_P_NODE_20805_length_284_cov_4.123223_g20386_i0 PRJNA493828 20805 284 4.123223 11.70995332 Gromochytrium mamkaevae 1486924 Fungi Fungi 78.7 4.33e-10   NTclustered gi|612507318|gb|KF586842.1| 1486924 g20386 i0 97.778 4.83450704225352 45 1 16 0 237 281 6131 6175 Gromochytrium mamkaevae strain CALU x-51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1373 78.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Gromochytriales Gromochytriaceae Gromochytrium Gromochytrium mamkaevae
6852090 6852090 PRJNA493828_P_NODE_12346_length_330_cov_70.416342_g11927_i0 PRJNA493828 12346 330 70.416342 232.3739286 Rhizophlyctis rosea 64517 Fungi Fungi 599 8.849999999999995e-167   NTclustered gi|82398309|gb|DQ273787.1| 64517 g11927 i0 99.694 84.430303030303 327 1 99 0 1 327 2280 1954 Rhizophlyctis rosea isolate AFTOL-ID 43 28S ribosomal RNA gene, partial sequence blastn 27862 599 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
8759281 8759281 PRJNA493828_P_NODE_11387_length_341_cov_42.208955_g10968_i0 PRJNA493828 11387 341 42.208955 143.93253655 root 1 Root_unresolved Root_unresolved 350 1.0200000000000001e-91   NTclustered gi|1866582754|gb|MT730929.1| 64517 g10968 i0 98.98 84.8709677419355 196 0 90 1 4 197 1423 1618 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28941 350 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
10678190 10678190 PRJNA493828_P_NODE_21969_length_280_cov_4.043478_g21550_i0 PRJNA493828 21969 280 4.043478 11.3217384 Harpochytrium sp. JEL196 1485251 Fungi Fungi 226 1.4399999999999994e-54   NTclustered gi|675391975|gb|KJ668089.1| 1485251 g21550 i0 82.206 100.828571428571 281 33 99 14 4 280 1807 1540 Harpochytrium sp. JEL196 28S ribosomal RNA gene, partial sequence blastn 28232 226 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Harpochytriaceae Harpochytrium Harpochytrium sp. JEL196
13228679 13228679 PRJNA493828_P_NODE_38791_length_242_cov_0.911243_g38372_i0 PRJNA493828 38791 242 0.911243 2.20520806 Chytridiomycetes 451435 Fungi Fungi 160 1.1399999999999996e-43   NR KAJ3033455.1 64517 g38372 i0 96 5.57851239669422 75 3 93 0 239 15 321 395 KAJ3033455.1 glutamate synthase [NADH] [Rhizophlyctis rosea] diamond 1350 161 0.993788819875776 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
13228784 13228784 PRJNA493828_P_NODE_45931_length_211_cov_5.840580_g45512_i0 PRJNA493828 45931 211 5.84058 12.3236238 Batrachochytrium dendrobatidis 109871 Fungi Fungi 248 2.2e-61   NTclustered gi|2897841418|gb|CP161937.1| 109871 g45512 i0 87.793 108.625592417062 213 24 100 2 1 211 40870 40658 Batrachochytrium dendrobatidis strain JEL423 chromosome 15 blastn 22920 248 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
14503492 14503492 PRJNA493828_P_NODE_32972_length_250_cov_0.870056_g32553_i0 PRJNA493828 32972 250 0.870056 2.17514 Eukaryota 2759 Fungi Fungi 97.4 2.4e-21   NR KAI9002146.1 82268 g32553 i0 65.3 2.7 72 25 86.4 0 28 243 840 911 KAI9002146.1 hypothetical protein DFJ74DRAFT_696885 [Hyaloraphidium curvatum] diamond 675 97.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
18958276 18958276 PRJNA493828_P_NODE_45515_length_214_cov_11.836879_g45096_i0 PRJNA493828 45515 214 11.836879 25.33092106 Rhizophlyctis 64515 Fungi Fungi 355 1.28e-93   NTclustered gi|1866582754|gb|MT730929.1| 64517 g45096 i0 99.487 91.107476635514 195 1 91 0 17 211 1476 1282 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19497 355 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
19600374 19600374 PRJNA493828_P_NODE_13116_length_322_cov_1.546185_g12697_i0 PRJNA493828 13116 322 1.546185 4.9787157 Dendrochytridium crassum 1352835 Fungi Fungi 119 2.94e-22   NTclustered gi|82398285|gb|DQ273785.1| 1352835 g12697 i0 87.379 4.03416149068323 103 13 32 0 4 106 1982 1880 Dendrochytridium crassum isolate AFTOL-ID 41 28S ribosomal RNA gene, partial sequence blastn 1299 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Dendrochytridium Dendrochytridium crassum
19600757 19600757 PRJNA493828_P_NODE_3896_length_548_cov_3.378947_g3518_i0 PRJNA493828 3896 548 3.378947 18.51662956 Synchytrium sp. 1971732 Fungi Fungi 93.5 3.18e-14   NTclustered gi|1168020523|gb|KY800404.1| 1971732 g3518 i0 83.168 0.786496350364963 101 17 18 0 424 524 906 1006 Synchytrium sp. voucher BPI 893319 large subunit ribosomal RNA gene, partial sequence blastn 431 93.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium sp.
26760252 26760252 PRJNA493828_P_NODE_24801_length_271_cov_2.161616_g24382_i0 PRJNA493828 24801 271 2.161616 5.85797936 Rhizophlyctis rosea 64517 Fungi Fungi 52 2.87e-5   NR KAJ3054246.1 64517 g24382 i0 88.1 0.464944649446494 42 5 46.5 0 126 1 250 291 KAJ3054246.1 hypothetical protein HK097_002278 [Rhizophlyctis rosea] diamond 126 52 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
27582336 27582336 PRJNA493828_P_NODE_39284_length_241_cov_2.744048_g38865_i0 PRJNA493828 39284 241 2.744048 6.61315568 Rhizophlyctis rosea 64517 Fungi Fungi 149 5.81e-40   NR KAJ3043839.1 64517 g38865 i0 97.3 2.76348547717842 74 2 92.1 0 5 226 159 232 KAJ3043839.1 hypothetical protein HK097_001651, partial [Rhizophlyctis rosea] diamond 666 149 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
27677423 27677423 PRJNA493828_P_NODE_28304_length_260_cov_4.395722_g27885_i0 PRJNA493828 28304 260 4.395722 11.4288772 Rhizophlyctis rosea 64517 Fungi Fungi 162 1.39e-45   NR KAJ3050087.1 64517 g27885 i0 90 0.923076923076923 80 8 92.3 0 255 16 201 280 KAJ3050087.1 hypothetical protein HK097_008927 [Rhizophlyctis rosea] diamond 240 162 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
27803557 27803557 PRJNA493828_P_NODE_21024_length_284_cov_1.293839_g20605_i0 PRJNA493828 21024 284 1.293839 3.67450276 Rhizophlyctis rosea 64517 Fungi Fungi 150 2.2e-42   NR KAJ3038505.1 64517 g20605 i0 74.1 1.1830985915493 112 6 94 1 5 271 170 281 KAJ3038505.1 hypothetical protein HK097_003156 [Rhizophlyctis rosea] diamond 336 150 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
27834861 27834861 PRJNA493828_P_NODE_11904_length_336_cov_1.098859_g11485_i0 PRJNA493828 11904 336 1.098859 3.69216624 Chytriomyces hyalinus 4814 Fungi Fungi 66.6 2.24e-10   NR KAJ3408168.1 4814 g11485 i0 76.8 0.616071428571429 69 16 61.6 0 2 208 192 260 KAJ3408168.1 hypothetical protein HDU80_006682, partial [Chytriomyces hyalinus] diamond 207 66.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
28466635 28466635 PRJNA493828_P_NODE_26166_length_267_cov_1.530928_g25747_i0 PRJNA493828 26166 267 1.530928 4.08757776 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 96.3 3.36e-21   NR KAH9257925.1 1357716 g25747 i0 57.9 0.853932584269663 76 32 85.4 0 30 257 261 336 KAH9257925.1 hypothetical protein BASA81_003944 [Batrachochytrium salamandrivorans] diamond 228 96.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
28529771 28529771 PRJNA493828_P_NODE_40127_length_240_cov_2.796407_g39708_i0 PRJNA493828 40127 240 2.796407 6.7113768 Rhizophlyctis rosea 64517 Fungi Fungi 149 8.99e-40   NR KAJ3050661.1 64517 g39708 i0 96.1 0.95 76 3 95 0 236 9 229 304 KAJ3050661.1 Transketolase [Rhizophlyctis rosea] diamond 228 149 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
28656023 28656023 PRJNA493828_P_NODE_30227_length_255_cov_3.065934_g29808_i0 PRJNA493828 30227 255 3.065934 7.8181317 Rhizophlyctis rosea 64517 Fungi Fungi 155 1.39e-41   NR KAJ3053137.1 64517 g29808 i0 85 0.941176470588235 80 12 94.1 0 254 15 123 202 KAJ3053137.1 hypothetical protein HK097_004939 [Rhizophlyctis rosea] diamond 240 155 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
28971749 28971749 PRJNA493828_P_NODE_48048_length_199_cov_5.531746_g47629_i0 PRJNA493828 48048 199 5.531746 11.00817454 Rhizophlyctis rosea 64517 Fungi Fungi 89.4 1.77e-20   NR KAJ3041088.1 64517 g47629 i0 72.2 0.814070351758794 54 15 81.4 0 6 167 113 166 KAJ3041088.1 hypothetical protein HDV00_009988 [Rhizophlyctis rosea] diamond 162 89.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
29634328 29634328 PRJNA493828_P_NODE_47030_length_204_cov_8.633588_g46611_i0 PRJNA493828 47030 204 8.633588 17.61251952 Cladochytrium replicatum 109936 Fungi Fungi 47.8 3.88e-4   NR KAI8803015.1 109936 g46611 i0 44.4 2.35294117647059 45 25 66.2 0 135 1 221 265 KAI8803015.1 WD40-repeat-containing domain protein [Cladochytrium replicatum] diamond 480 47.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
29792429 29792429 PRJNA493828_P_NODE_9831_length_363_cov_2.803448_g9413_i0 PRJNA493828 9831 363 2.803448 10.17651624 Nowakowskiella sp. JEL 2012159 Fungi Fungi 57.4 3.6e-8   NR KAJ1542279.1 2732417 g9413 i0 55.6 0.892561983471074 54 24 44.6 0 146 307 13 66 KAJ1542279.1 Protein TAR1, partial [Nowakowskiella sp. JEL0078] diamond 324 57.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JEL0078
30060743 30060743 PRJNA493828_P_NODE_12591_length_328_cov_1.207843_g12172_i0 PRJNA493828 12591 328 1.207843 3.96172504 Eukaryota 2759 Fungi Fungi 72 3.33e-12   NR KAI9006323.1 82268 g12172 i0 36.4 15.4939024390244 99 58 90.5 1 25 321 194 287 KAI9006323.1 WD40-repeat-containing domain protein [Hyaloraphidium curvatum] diamond 5082 72.4 0.994475138121547 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
30155400 30155400 PRJNA493828_P_NODE_20952_length_284_cov_1.710900_g20533_i0 PRJNA493828 20952 284 1.7109 4.858956 Fungi 4751 Fungi Fungi 105 2.68e-27   NR KAJ3161632.1 109894 g20533 i0 78.8 18.0211267605634 66 14 69.7 0 275 78 41 106 KAJ3161632.1 40S ribosomal protein S28 [Geranomyces variabilis] diamond 5118 106 0.990566037735849 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
30203005 30203005 PRJNA493828_P_NODE_39692_length_241_cov_0.916667_g39273_i0 PRJNA493828 39692 241 0.916667 2.20916747 Rhizophlyctis rosea 64517 Fungi Fungi 121 6.61e-30   NR KAJ3050202.1 64517 g39273 i0 81.1 0.921161825726141 74 14 92.1 0 237 16 376 449 KAJ3050202.1 U3 snoRNP protein [Rhizophlyctis rosea] diamond 222 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
31056670 31056670 PRJNA493828_P_NODE_45675_length_213_cov_5.935714_g45256_i0 PRJNA493828 45675 213 5.935714 12.64307082 Rhizophlyctis rosea 64517 Fungi Fungi 122 1.91e-32   NR KAJ3035888.1 64517 g45256 i0 92.2 0.901408450704225 64 5 90.1 0 208 17 5 68 KAJ3035888.1 hypothetical protein HK097_003995, partial [Rhizophlyctis rosea] diamond 192 122 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
31467549 31467549 PRJNA493828_P_NODE_36856_length_244_cov_3.432749_g36437_i0 PRJNA493828 36856 244 3.432749 8.37590756 Rhizophlyctis rosea 64517 Fungi Fungi 141 1.2999999999999998e-38   NR KAJ3028043.1 64517 g36437 i0 85.5 1.86885245901639 76 9 93.4 1 241 14 113 186 KAJ3028043.1 hypothetical protein HDV00_010687 [Rhizophlyctis rosea] diamond 456 141 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
32290279 32290279 PRJNA493828_P_NODE_34359_length_248_cov_0.880000_g33940_i0 PRJNA493828 34359 248 0.88 2.1824 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 79.3 1.93e-15   NR KAH9255272.1 1357716 g33940 i0 61.3 0.967741935483871 80 25 89.5 1 246 25 215 294 KAH9255272.1 hypothetical protein BASA81_006712 [Batrachochytrium salamandrivorans] diamond 240 79.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
32606104 32606104 PRJNA493828_P_NODE_22140_length_280_cov_1.449275_g21721_i0 PRJNA493828 22140 280 1.449275 4.05797 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 112 1.04e-28   NR KAH9252255.1 1357716 g21721 i0 84.7 0.632142857142857 59 9 63.2 0 102 278 3 61 KAH9252255.1 hypothetical protein BASA81_009857 [Batrachochytrium salamandrivorans] diamond 177 112 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
32668996 32668996 PRJNA493828_P_NODE_23080_length_277_cov_1.269608_g22661_i0 PRJNA493828 23080 277 1.269608 3.51681416 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 130 1.16e-32   NR KAH9249840.1 1357716 g22661 i0 74.2 1.0072202166065 93 23 99.6 1 2 277 703 795 KAH9249840.1 hypothetical protein BASA81_012435 [Batrachochytrium salamandrivorans] diamond 279 130 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
32794773 32794773 PRJNA493828_P_NODE_40940_length_237_cov_3.048780_g40521_i0 PRJNA493828 40940 237 3.04878 7.2256086 Rhizophlyctis rosea 64517 Fungi Fungi 155 2.61e-42   NR KAJ3055603.1 64517 g40521 i0 94.8 0.974683544303797 77 4 97.5 0 232 2 508 584 KAJ3055603.1 TOM (translocase of outer membrane) complex component [Rhizophlyctis rosea] diamond 231 155 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;