RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493828" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493828 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11953552 11953552 PRJNA493828_P_NODE_37510_length_244_cov_0.795322_g37091_i0 PRJNA493828 37510 244 0.795322 1.94058568 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 329 9.08e-86   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g37091 i0 91.057 174.774590163934 246 18 100 4 1 244 3680618 3680375 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 42645 329 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
13228889 13228889 PRJNA493828_P_NODE_8131_length_394_cov_6.532710_g7716_i0 PRJNA493828 8131 394 6.53271 25.7388774 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 285 3.4099999999999996e-72   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g7716 i0 81.37 68.9543147208122 365 55 91 11 6 365 597575 597219 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 27168 285 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
19600777 19600777 PRJNA493828_P_NODE_40616_length_238_cov_3.345455_g40197_i0 PRJNA493828 40616 238 3.345455 7.9621829 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 219 1.99e-52   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g40197 i0 88.462 59.7941176470588 182 19 76 2 39 218 3680902 3681083 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 14231 219 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;