RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA493828" and tax_phylum = "Candidatus Kapaibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1749916 1749916 PRJNA493828_P_NODE_48802_length_196_cov_4.065041_g48383_i0 PRJNA493828 48802 196 4.065041 7.96748036 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 255 1.2e-63   NTclustered gi|2621704217|emb|OY761611.1| 2447898 g48383 i0 91.053 265.290816326531 190 15 97 1 5 194 1419656 1419469 MAG: Candidatus Kapabacteria bacterium isolate 963550f5-4d88-4eb0-99f7-25ebda648600 genome assembly, chromosome: 1 blastn 51997 255 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
3025609 3025609 PRJNA493828_P_NODE_2903_length_625_cov_5.969203_g2560_i0 PRJNA493828 2903 625 5.969203 37.30751875 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 785 0   NTclustered gi|2518551211|emb|OX638338.1| 2447898 g2560 i0 89.633 354.5904 627 52 99 7 4 620 2780783 2780160 MAG: Candidatus Kapabacteria bacterium isolate 9634bca7-0036-4470-acfa-8c32e30c46ef genome assembly, chromosome: 1 blastn 221619 785 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
20876543 20876543 PRJNA493828_P_NODE_34297_length_248_cov_0.880000_g33878_i0 PRJNA493828 34297 248 0.88 2.1824 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 281 2.63e-71   NTclustered gi|2907625638|emb|OZ223198.1| 2447898 g33878 i0 87.2 63.7338709677419 250 28 100 4 1 248 1118162 1117915 MAG: Candidatus Kapaibacterium sp. isolate 09316a08-0405-4927-8c64-54324f316411 genome assembly, chromosome: 2 blastn 15806 281 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
22151575 22151575 PRJNA493828_P_NODE_6818_length_426_cov_5.696884_g6409_i0 PRJNA493828 6818 426 5.696884 24.26872584 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 425 2.1e-114   NTclustered gi|2518551211|emb|OX638338.1| 2447898 g6409 i0 84.919 99.4178403755868 431 53 100 9 1 426 2781037 2781460 MAG: Candidatus Kapabacteria bacterium isolate 9634bca7-0036-4470-acfa-8c32e30c46ef genome assembly, chromosome: 1 blastn 42352 425 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;