RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA493828", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 4 ✖

bioproject 1

  • PRJNA493828 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2382255 2382255 PRJNA493828_P_NODE_46502_length_207_cov_10.194030_g46083_i0 PRJNA493828 46502 207 10.19403 21.1016421 Gammaretrovirus 153135 Viruses Viruses 209 1.02e-49   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g46083 i0 98.319 34.7246376811594 119 2 57 0 80 198 4612 4494 Moloney murine leukemia virus, complete genome blastn 7188 209 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
7484437 7484437 PRJNA493828_P_NODE_16226_length_309_cov_37.686441_g15807_i0 PRJNA493828 16226 309 37.686441 116.45110269 Gammaretrovirus 153135 Viruses Viruses 521 1.8299999999999998e-143   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g15807 i0 97.386 98.8770226537217 306 8 99 0 2 307 4424 4119 Moloney murine leukemia virus, complete genome blastn 30553 521 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
10034818 10034818 PRJNA493828_P_NODE_12528_length_328_cov_23.772549_g12109_i0 PRJNA493828 12528 328 23.772549 77.97396072 Gammaretrovirus 153135 Viruses Viruses 562 1.15e-155   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g12109 i0 100 89.5792682926829 304 0 93 0 22 325 4177 3874 Moloney murine leukemia virus, complete genome blastn 29382 562 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
13860300 13860300 PRJNA493828_P_NODE_451_length_1464_cov_80.355859_g305_i0 PRJNA493828 451 1464 80.355859 1176.40977576 Gammaretrovirus 153135 Viruses Viruses 2302 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g305 i0 97.754 91.3244535519126 1336 30 91 0 79 1414 2596 3931 Moloney murine leukemia virus, complete genome blastn 133699 2302 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;