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contig_metadata

10 rows where bioproject = "PRJNA493828", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 10 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 10 ✖

bioproject 1

  • PRJNA493828 · 10 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1749954 1749954 PRJNA493828_P_NODE_6682_length_429_cov_11.078652_g6276_i0 PRJNA493828 6682 429 11.078652 47.52741708 Microsporidium sp. 3 NR-2013 1333714 Fungi Fungi 732 0   NTclustered gi|499157845|gb|JX839890.1| 1333714 g6276 i0 97.436 81.6596736596737 429 11 100 0 1 429 1222 794 Microsporidium sp. 3 NR-2013 small subunit ribosomal RNA gene, partial sequence blastn 35032 732 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. 3 NR-2013
3025573 3025573 PRJNA493828_P_NODE_27243_length_263_cov_17.484211_g26824_i0 PRJNA493828 27243 263 17.484211 45.98347493 Vittaforma corneae 42399 Fungi Fungi 154 6.4e-33   NTclustered gi|667639983|ref|XR_552275.1| 993615 g26824 i0 83.051 24.6653992395437 177 22 66 6 90 263 2361 2190 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 6487 154 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
6852668 6852668 PRJNA493828_P_NODE_6406_length_437_cov_14.969780_g6006_i0 PRJNA493828 6406 437 14.96978 65.4179386 Ecytonucleospora nucleophila 1295219 Fungi Fungi 571 2.6199999999999993e-158   NTclustered gi|529283990|gb|KF135643.1| 1295219 g6006 i0 90.698 90.2151029748284 430 38 98 2 9 437 1294 866 Enterospora nucleophila isolate ENTA2 small subunit ribosomal RNA gene, partial sequence blastn 39424 571 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora nucleophila
6852684 6852684 PRJNA493828_P_NODE_7446_length_410_cov_3.296736_g7034_i0 PRJNA493828 7446 410 3.296736 13.5166176 Mitosporidium daphniae 1485682 Fungi Fungi 211 6.14e-50   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g7034 i0 83.621 14.4292682926829 232 30 71 4 125 356 5271 5494 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5916 211 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
10678105 10678105 PRJNA493828_P_NODE_1669_length_828_cov_9.002649_g1358_i0 PRJNA493828 1669 828 9.002649 74.54193372 Microsporidium sp. LVPEI.SMW V3S1-FR 1734473 Fungi Fungi 1469 0   NTclustered gi|937656209|gb|KR303710.1| 1734473 g1358 i0 99.875 90.6980676328502 799 0 96 1 1 799 798 1 Microsporidium sp. LVPEI.SMW V3S1-FR small subunit ribosomal RNA gene, partial sequence blastn 75098 1469 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. LVPEI.SMW V3S1-FR
10678413 10678413 PRJNA493828_P_NODE_369_length_1587_cov_7.037649_g240_i0 PRJNA493828 369 1587 7.037649 111.68748963 Vittaforma corneae 42399 Fungi Fungi 1748 0   NTclustered gi|667639983|ref|XR_552275.1| 993615 g240 i0 86.621 13.296786389414 1592 200 100 12 1 1587 12 1595 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 21102 1748 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
14503402 14503402 PRJNA493828_P_NODE_26712_length_265_cov_2.385417_g26293_i0 PRJNA493828 26712 265 2.385417 6.32135505 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 444 3.42e-120   NTclustered gi|2522768008|gb|OR162445.1| 646526 g26293 i0 96.981 37.0566037735849 265 7 100 1 1 265 3923 3660 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9820 444 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
15777147 15777147 PRJNA493828_P_NODE_1733_length_812_cov_11.642760_g1421_i0 PRJNA493828 1733 812 11.642760000000001 94.5392112 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 1003 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g1421 i0 89.038 95.5406403940887 821 75 99 11 2 812 826 11 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 77579 1003 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
15777407 15777407 PRJNA493828_P_NODE_353_length_1618_cov_17.886731_g228_i0 PRJNA493828 353 1618 17.886731 289.40730758 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 721 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g228 i0 84.924 12.1081582200247 723 97 93 12 1 716 1751 2468 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19591 721 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
17684511 17684511 PRJNA493828_P_NODE_6274_length_441_cov_6.502717_g5875_i0 PRJNA493828 6274 441 6.502717 28.67698197 Fungi 4751 Fungi Fungi 182 5.21e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g5875 i0 95.614 27.6077097505669 114 4 26 1 71 184 5649 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12175 182 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;