contig_metadata
22 rows where bioproject = "PRJNA493828", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 474980 | 474980 | PRJNA493828_P_NODE_44521_length_223_cov_4.973333_g44102_i0 | PRJNA493828 | 44521 | 223 | 4.973333 | 11.09053259 | Candidatus Saccharimonadia bacterium | 2890869 | Bacteria | Bacteria | 311 | 2.9600000000000003e-80 | NTclustered | gi|2874254002|emb|OY970327.1| | 2890869 | g44102 | i0 | 92.593 | 67.5605381165919 | 216 | 16 | 97 | 0 | 8 | 223 | 678170 | 678385 | MAG: Candidatus Saccharimonadia bacterium isolate MFD01275.bin.c.7 genome assembly, chromosome: 1 | blastn | 15066 | 311 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadia bacterium | |||||
| 1106386 | 1106386 | PRJNA493828_P_NODE_23441_length_275_cov_7.430693_g23022_i0 | PRJNA493828 | 23441 | 275 | 7.430693 | 20.43440575 | Candidatus Saccharimonas | 1331051 | Bacteria | Bacteria | 436 | 5.969999999999999e-118 | NTclustered | gi|499052612|gb|CP005957.1| | 1332188 | g23022 | i0 | 95.62 | 82.9454545454546 | 274 | 9 | 99 | 3 | 1 | 272 | 694966 | 694694 | Candidatus Saccharimonas aalborgensis isolate TM71 chromosome, complete genome | blastn | 22810 | 436 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonas | Candidatus Saccharimonas aalborgensis | ||
| 5578321 | 5578321 | PRJNA493828_P_NODE_31485_length_252_cov_1.720670_g31066_i0 | PRJNA493828 | 31485 | 252 | 1.72067 | 4.3360884 | uncultured Candidatus Saccharibacteria bacterium | 179883 | Bacteria | Bacteria | 342 | 1.21e-89 | NTclustered | gi|2874254031|emb|OY970356.1| | 179883 | g31066 | i0 | 92.5 | 85.2738095238095 | 240 | 17 | 95 | 1 | 9 | 248 | 599309 | 599547 | MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD05684.bin.c.4 genome assembly, chromosome: 1 | blastn | 21489 | 342 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | uncultured Candidatus Saccharibacteria bacterium | ||||||
| 6852535 | 6852535 | PRJNA493828_P_NODE_41226_length_236_cov_3.049080_g40807_i0 | PRJNA493828 | 41226 | 236 | 3.04908 | 7.1958288 | Candidatus Saccharibacteria bacterium oral taxon 488 | 713059 | Bacteria | Bacteria | 348 | 2.41e-91 | NTclustered | gi|1842065531|gb|CP040002.1| | 713059 | g40807 | i0 | 93.562 | 330.733050847458 | 233 | 15 | 99 | 0 | 4 | 236 | 150746 | 150978 | Candidatus Saccharibacteria bacterium oral taxon 488 strain AC002 chromosome, complete genome | blastn | 78053 | 348 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 488 | ||||||
| 8759697 | 8759697 | PRJNA493828_P_NODE_48227_length_198_cov_6.656000_g47808_i0 | PRJNA493828 | 48227 | 198 | 6.656 | 13.17888 | Candidatus Nanosynbacteraceae | 2093822 | Bacteria | Bacteria | 324 | 3.29e-84 | NTclustered | gi|1842054184|gb|CP039999.1| | 713059 | g47808 | i0 | 98.895 | 327.166666666667 | 181 | 2 | 91 | 0 | 4 | 184 | 144166 | 144346 | Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome | blastn | 64779 | 324 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 488 | ||||||
| 10034908 | 10034908 | PRJNA493828_P_NODE_19408_length_289_cov_6.435185_g18989_i0 | PRJNA493828 | 19408 | 289 | 6.435185 | 18.59768465 | Candidatus Nanosynbacter | 2093823 | Bacteria | Bacteria | 490 | 4.78e-134 | NTclustered | gi|1663049602|gb|CP040008.1| | 2572087 | g18989 | i0 | 97.232 | 137.017301038062 | 289 | 8 | 100 | 0 | 1 | 289 | 140124 | 139836 | Candidatus Saccharibacteria bacterium oral taxon 955 strain PM004 chromosome, complete genome | blastn | 39598 | 490 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 955 | ||||||
| 11953395 | 11953395 | PRJNA493828_P_NODE_26830_length_265_cov_1.463542_g26411_i0 | PRJNA493828 | 26830 | 265 | 1.463542 | 3.8783863 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 372 | 1.64e-98 | NTclustered | gi|1950821269|gb|CP066696.1| | 2026720 | g26411 | i0 | 92.636 | 61.411320754717 | 258 | 19 | 97 | 0 | 5 | 262 | 799583 | 799840 | Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome | blastn | 16274 | 372 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 13228729 | 13228729 | PRJNA493828_P_NODE_4251_length_527_cov_3.792952_g3865_i0 | PRJNA493828 | 4251 | 527 | 3.792952 | 19.98885704 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 832 | 0 | NTclustered | gi|1958075319|gb|CP064995.1| | 2026720 | g3865 | i0 | 96.614 | 76.753320683112 | 502 | 16 | 95 | 1 | 25 | 525 | 693970 | 693469 | Candidatus Saccharibacteria bacterium isolate Hjor_18-Q3-R7-51_MAXAC.102_uni chromosome, complete genome | blastn | 40449 | 832 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 17052282 | 17052282 | PRJNA493828_P_NODE_46914_length_205_cov_5.227273_g46495_i0 | PRJNA493828 | 46914 | 205 | 5.227273 | 10.71590965 | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 | 1619070 | Bacteria | Bacteria | 233 | 5.96e-57 | NTclustered | gi|837350690|gb|CP011211.1| | 1619070 | g46495 | i0 | 89.418 | 81.8390243902439 | 189 | 15 | 91 | 5 | 6 | 191 | 850728 | 850542 | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome | blastn | 16777 | 233 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 | ||||||
| 23427309 | 23427309 | PRJNA493828_P_NODE_40499_length_239_cov_2.120482_g40080_i0 | PRJNA493828 | 40499 | 239 | 2.120482 | 5.06795198 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 298 | 2.5e-76 | NTclustered | gi|1950821269|gb|CP066696.1| | 2026720 | g40080 | i0 | 91.031 | 5.60251046025105 | 223 | 17 | 92 | 2 | 2 | 221 | 798406 | 798184 | Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome | blastn | 1339 | 298 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 23427358 | 23427358 | PRJNA493828_P_NODE_44119_length_226_cov_2.836601_g43700_i0 | PRJNA493828 | 44119 | 226 | 2.836601 | 6.41071826 | Candidatus Saccharibacteria bacterium RAAC3_TM7_1 | 1394711 | Bacteria | Bacteria | 110 | 1.18e-19 | NTclustered | gi|563353835|gb|CP006915.1| | 1394711 | g43700 | i0 | 76.415 | 4.16814159292035 | 212 | 44 | 92 | 4 | 1 | 209 | 450589 | 450797 | Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome | blastn | 942 | 110 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium RAAC3_TM7_1 | ||||||
| 24058510 | 24058510 | PRJNA493828_P_NODE_3859_length_550_cov_3.813417_g3481_i0 | PRJNA493828 | 3859 | 550 | 3.813417 | 20.9737935 | Candidatus Saccharimonadia | 2093818 | Bacteria | Bacteria | 881 | 0 | NTclustered | gi|499052612|gb|CP005957.1| | 1332188 | g3481 | i0 | 95.956 | 98.6454545454545 | 544 | 21 | 99 | 1 | 8 | 550 | 692525 | 691982 | Candidatus Saccharimonas aalborgensis isolate TM71 chromosome, complete genome | blastn | 54255 | 881 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonas | Candidatus Saccharimonas aalborgensis | ||
| 27393105 | 27393105 | PRJNA493828_P_NODE_12263_length_331_cov_4.689922_g11844_i0 | PRJNA493828 | 12263 | 331 | 4.689922 | 15.52364182 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 49.3 | 4.83e-4 | NR | MCG5105720.1 | 2026720 | g11844 | i0 | 39.7 | 0.706948640483384 | 78 | 45 | 69.8 | 2 | 254 | 24 | 14 | 90 | MCG5105720.1 phage tail tip lysozyme [Candidatus Saccharibacteria bacterium] | diamond | 234 | 49.3 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 27456310 | 27456310 | PRJNA493828_P_NODE_38623_length_242_cov_1.763314_g38204_i0 | PRJNA493828 | 38623 | 242 | 1.763314 | 4.26721988 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 166 | 1.89e-50 | NR | MBN9398527.1 | 2026720 | g38204 | i0 | 96.3 | 0.991735537190083 | 80 | 3 | 99.2 | 0 | 2 | 241 | 95 | 174 | MBN9398527.1 NUDIX hydrolase [Candidatus Saccharibacteria bacterium] | diamond | 240 | 166 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 27582333 | 27582333 | PRJNA493828_P_NODE_31764_length_251_cov_2.679775_g31345_i0 | PRJNA493828 | 31764 | 251 | 2.679775 | 6.72623525 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 119 | 1.02e-30 | NR | MBC7546575.1 | 2026720 | g31345 | i0 | 71.1 | 0.99203187250996006 | 83 | 24 | 99.2 | 0 | 1 | 249 | 123 | 205 | MBC7546575.1 M15 family metallopeptidase [Candidatus Saccharibacteria bacterium] | diamond | 249 | 119 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 27913579 | 27913579 | PRJNA493828_P_NODE_27745_length_262_cov_2.222222_g27326_i0 | PRJNA493828 | 27745 | 262 | 2.222222 | 5.82222164 | Bacteria | 2 | Bacteria | Bacteria | 124 | 2.62e-32 | NR | OGL22419.1 | 1802132 | g27326 | i0 | 69.4 | 5.95419847328244 | 85 | 26 | 97.3 | 0 | 2 | 256 | 229 | 313 | OGL22419.1 MAG: hypothetical protein A2707_03795 [Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15] | diamond | 1560 | 124 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15 | ||||||
| 28213616 | 28213616 | PRJNA493828_P_NODE_28806_length_259_cov_2.311828_g28387_i0 | PRJNA493828 | 28806 | 259 | 2.311828 | 5.98763452 | Candidatus Saccharimonadales bacterium | 2973664 | Bacteria | Bacteria | 90.9 | 2.69e-21 | NR | HSX29533.1 | 2973664 | g28387 | i0 | 51.9 | 0.891891891891892 | 77 | 37 | 89.2 | 0 | 233 | 3 | 7 | 83 | HSX29533.1 hypothetical protein [Candidatus Saccharimonadales bacterium] | diamond | 231 | 90.9 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadales bacterium | ||||
| 28955918 | 28955918 | PRJNA493828_P_NODE_27668_length_262_cov_2.978836_g27249_i0 | PRJNA493828 | 27668 | 262 | 2.978836 | 7.80455032 | Candidatus Saccharimonadaceae | 2171986 | Bacteria | Bacteria | 178 | 3.2599999999999998e-52 | NR | RKV95619.1 | 1917697 | g27249 | i0 | 98.8 | 2.95419847328244 | 86 | 1 | 98.5 | 0 | 260 | 3 | 42 | 127 | RKV95619.1 MAG: hypothetical protein D8G53_08520, partial [Candidatus Saccharimonas sp.] | diamond | 774 | 178 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonas | Candidatus Saccharimonas sp. | ||
| 29098055 | 29098055 | PRJNA493828_P_NODE_20548_length_285_cov_3.900943_g20129_i0 | PRJNA493828 | 20548 | 285 | 3.900943 | 11.11768755 | Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1 | 1986206 | Bacteria | Bacteria | 173 | 4.749999999999999e-52 | NR | WP_129693356.1 | 1986206 | g20129 | i0 | 93.7 | 1 | 95 | 6 | 100 | 0 | 285 | 1 | 59 | 153 | WP_129693356.1 TrmB family transcriptional regulator [Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1] | diamond | 285 | 173 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Nanosynsacchari | Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1 | ||
| 30471774 | 30471774 | PRJNA493828_P_NODE_28573_length_260_cov_1.304813_g28154_i0 | PRJNA493828 | 28573 | 260 | 1.304813 | 3.3925138 | Bacteria | 2 | Bacteria | Bacteria | 143 | 1.77e-39 | NR | MBN9397617.1 | 2026720 | g28154 | i0 | 72.1 | 2.97692307692308 | 86 | 24 | 99.2 | 0 | 258 | 1 | 177 | 262 | MBN9397617.1 DUF916 domain-containing protein [Candidatus Saccharibacteria bacterium] | diamond | 774 | 144 | 0.993055555555556 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 31213874 | 31213874 | PRJNA493828_P_NODE_19815_length_288_cov_2.041860_g19396_i0 | PRJNA493828 | 19815 | 288 | 2.04186 | 5.8805568 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 181 | 1.01e-51 | NR | MCA9335546.1 | 2026720 | g19396 | i0 | 97.9 | 1 | 96 | 2 | 100 | 0 | 1 | 288 | 355 | 450 | MCA9335546.1 recombinase family protein [Candidatus Saccharibacteria bacterium] | diamond | 288 | 181 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 31293125 | 31293125 | PRJNA493828_P_NODE_44095_length_226_cov_3.013072_g43676_i0 | PRJNA493828 | 44095 | 226 | 3.013072 | 6.80954272 | Bacteria | 2 | Bacteria | Bacteria | 106 | 2.4e-25 | NR | MBC7868793.1 | 2026720 | g43676 | i0 | 68 | 2.98672566371681 | 75 | 24 | 99.6 | 0 | 226 | 2 | 73 | 147 | MBC7868793.1 glycosyltransferase [Candidatus Saccharibacteria bacterium] | diamond | 675 | 106 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;