RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA493827", tax_phylum = "Candidatus Bathyarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Bathyarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493827 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27487682 27487682 PRJNA493827_P_NODE_239843_length_205_cov_17.750000_g237644_i0 PRJNA493827 239843 205 17.75 36.3875 Candidatus Bathyarchaeota archaeon B26-1 1779370 Archaea Archaea 68.6 1.38e-13   NR KYH39817.1 1779370 g237644 i0 56.6 1.43414634146341 53 23 77.6 0 15 173 1 53 KYH39817.1 MAG: 30S ribosomal protein S14 [Candidatus Bathyarchaeota archaeon B26-1] diamond 294 68.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon B26-1
29224482 29224482 PRJNA493827_P_NODE_26709_length_733_cov_4.506061_g24736_i0 PRJNA493827 26709 733 4.506061 33.02942713 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 50.8 0.00111   NR UCH37166.1 2026714 g24736 i0 28.2 0.888130968622101 103 66 42.2 1 592 284 83 177 UCH37166.1 MAG: SIMPL domain-containing protein, partial [Candidatus Bathyarchaeota archaeon] diamond 651 50.8 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;