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contig_metadata

12 rows where bioproject = "PRJNA493827", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 12 ✖

tax_kingdom 1

  • Methanobacteriati · 12 ✖

bioproject 1

  • PRJNA493827 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6847059 6847059 PRJNA493827_P_NODE_10146_length_1311_cov_27.742326_g8886_i0 PRJNA493827 10146 1311 27.742326 363.70189386 root 1 Root_unresolved Root_unresolved 138 7.48e-33   NR MEM0354192.1 1906666 g8886 i0 32.6 1.30663615560641 291 179 65.7 7 81 941 25 302 MEM0354192.1 hypothetical protein [Thermoplasmata archaeon] diamond 1713 139 0.992805755395683 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
8125355 8125355 PRJNA493827_P_NODE_231587_length_241_cov_1.113095_g229389_i0 PRJNA493827 231587 241 1.113095 2.68255895 Thermoplasmatota archaeon 2806419 Archaea Archaea 125 3.93e-33   NR MEC8398227.1 2806419 g229389 i0 78.2 0.970954356846473 78 17 97.1 0 2 235 197 274 MEC8398227.1 sodium/proton-translocating pyrophosphatase [Thermoplasmatota archaeon] diamond 234 125 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
11949373 11949373 PRJNA493827_P_NODE_154630_length_275_cov_3.049505_g152432_i0 PRJNA493827 154630 275 3.049505 8.38613875 Thermoplasmata archaeon 1906666 Archaea Archaea 84.7 8.84e-17   NR MEM0354231.1 1906666 g152432 i0 53.2 0.84 77 36 84 0 267 37 426 502 MEM0354231.1 hypothetical protein [Thermoplasmata archaeon] diamond 231 84.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
26696785 26696785 PRJNA493827_P_NODE_116041_length_317_cov_1.614754_g113843_i0 PRJNA493827 116041 317 1.614754 5.11877018 Thermoplasmata archaeon 1906666 Archaea Archaea 96.3 1.44e-20   NR MEM0354009.1 1906666 g113843 i0 46.2 3.5583596214511 104 54 97.5 2 314 6 563 665 MEM0354009.1 hypothetical protein [Thermoplasmata archaeon] diamond 1128 96.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29444987 29444987 PRJNA493827_P_NODE_231930_length_241_cov_0.916667_g229732_i0 PRJNA493827 231930 241 0.916667 2.20916747 Methanomethylophilus alvi 1291540 Archaea Archaea 42.4 0.0466   NR WP_015504930.1 1291540 g229732 i0 40.4 0.70954356846473 57 31 67.2 1 164 3 242 298 WP_015504930.1 tetratricopeptide repeat protein [Methanomethylophilus alvi] diamond 171 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae Methanomethylophilus Methanomethylophilus alvi
31594045 31594045 PRJNA493827_P_NODE_35696_length_618_cov_2.363303_g33538_i0 PRJNA493827 35696 618 2.363303 14.60521254 Thermoplasmata archaeon 1906666 Archaea Archaea 221 1.5e-69   NR MEM0354216.1 1906666 g33538 i0 51.2 0.985436893203884 203 99 98.5 0 617 9 2 204 MEM0354216.1 DNA-directed RNA polymerase subunit RpoH/Rpb5 C-terminal domain-containing protein [Thermoplasmata archaeon] diamond 609 221 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31751847 31751847 PRJNA493827_P_NODE_214017_length_245_cov_0.895349_g211819_i0 PRJNA493827 214017 245 0.895349 2.19360505 Thermoplasmata archaeon 1906666 Archaea Archaea 50.4 7.01e-5   NR MEM0354185.1 1906666 g211819 i0 35.3 2.33877551020408 68 36 73.5 1 19 198 310 377 MEM0354185.1 proliferating cell nuclear antigen (pcna) [Thermoplasmata archaeon] diamond 573 50.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32005070 32005070 PRJNA493827_P_NODE_17758_length_940_cov_1.921569_g16066_i0 PRJNA493827 17758 940 1.921569 18.0627486 Candidatus Saliniplasma sp. 3080558 Archaea Archaea 52 0.00222   NR MFO7793095.1 3080558 g16066 i0 48.9 0.871276595744681 45 23 14.4 0 321 455 274 318 MFO7793095.1 histidine ammonia-lyase [Candidatus Saliniplasma sp.] diamond 819 52 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Candidatus Halarchaeoplasmatales Candidatus Halarchaeoplasmataceae Candidatus Saliniplasma Candidatus Saliniplasma sp.
32337353 32337353 PRJNA493827_P_NODE_116899_length_316_cov_1.267490_g114701_i0 PRJNA493827 116899 316 1.26749 4.0052684 root 1 Root_unresolved Root_unresolved 137 7.690000000000001e-36   NR WP_188681549.1 399579 g114701 i0 58.4 10.6044303797468 101 41 95.9 1 6 308 181 280 WP_188681549.1 pyridoxal phosphate-dependent decarboxylase family protein [Thermogymnomonas acidicola] diamond 3351 138 0.992753623188406 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales   Thermogymnomonas Thermogymnomonas acidicola
32400557 32400557 PRJNA493827_P_NODE_128119_length_302_cov_1.340611_g125921_i0 PRJNA493827 128119 302 1.340611 4.04864522 root 1 Root_unresolved Root_unresolved 112 2.56e-26   NR MEM0354229.1 1906666 g125921 i0 46.5 2.95033112582781 99 53 98.3 0 1 297 428 526 MEM0354229.1 phage/plasmid primase, P4 family [Thermoplasmata archaeon] diamond 891 113 0.991150442477876 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32448264 32448264 PRJNA493827_P_NODE_214319_length_245_cov_0.895349_g212121_i0 PRJNA493827 214319 245 0.895349 2.19360505 Thermoplasmatota archaeon 2806419 Archaea Archaea 82 5.47e-16   NR HVL87529.1 2806419 g212121 i0 49.3 0.893877551020408 73 37 89.4 0 244 26 90 162 HVL87529.1 AarF/UbiB family protein [Thermoplasmatota archaeon] diamond 219 82 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32747596 32747596 PRJNA493827_P_NODE_43880_length_546_cov_1.856237_g41694_i0 PRJNA493827 43880 546 1.856237 10.13505402 Archaea 2157 Archaea Archaea 49.3 3.58e-4   NR HID25561.1 1906666 g41694 i0 49 1.52197802197802 51 26 28 0 510 358 4 54 HID25561.1 50S ribosomal protein P1 [Thermoplasmata archaeon] diamond 831 49.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;