RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA493827", tax_kingdom = "Loebvirae" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 4 ✖

bioproject 1

  • PRJNA493827 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3024793 3024793 PRJNA493827_P_NODE_80403_length_384_cov_1.540193_g78205_i0 PRJNA493827 80403 384 1.540193 5.91434112 Inoviridae sp. 2219103 Viruses Viruses 411 5.249999999999999e-110   NTclustered gi|1436206075|gb|MH617060.1| 2219103 g78205 i0 87.64 27.6744791666667 356 40 92 3 2 353 1598 1953 MAG: Inoviridae sp. isolate ctcg21, complete genome blastn 10627 411 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
14500053 14500053 PRJNA493827_P_NODE_184692_length_251_cov_0.865169_g182494_i0 PRJNA493827 184692 251 0.865169 2.17157419 Inoviridae sp. 2219103 Viruses Viruses 448 2.48e-121   NTclustered gi|2059802564|tpg|BK039727.1| 2219103 g182494 i0 98.805 5 251 3 100 0 1 251 4370 4620 MAG TPA_asm: Inoviridae sp. isolate ctJqL3, partial genome blastn 1255 448 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
18324796 18324796 PRJNA493827_P_NODE_50235_length_503_cov_2.376744_g48045_i0 PRJNA493827 50235 503 2.376744 11.95502232 Inoviridae sp. 2219103 Viruses Viruses 839 0   NTclustered gi|2057778617|tpg|BK054669.1| 2219103 g48045 i0 96.813 99.6381709741551 502 16 99 0 1 502 2893 2392 MAG TPA_asm: Inoviridae sp. isolate ct21f1, partial genome blastn 50118 839 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
28181978 28181978 PRJNA493827_P_NODE_197266_length_248_cov_1.748571_g195068_i0 PRJNA493827 197266 248 1.748571 4.33645608 Tubulavirales sp. 2833306 Viruses Viruses 77.4 2.1e-14   NR XOF05256.1 2833306 g195068 i0 48.1 0.931451612903226 77 40 93.1 0 236 6 64 140 XOF05256.1 MAG: replication initiation protein [Tubulavirales sp.] diamond 231 77.4 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales     Tubulavirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;