RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA493827", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA493827 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
471496 471496 PRJNA493827_P_NODE_190081_length_250_cov_0.870056_g187883_i0 PRJNA493827 190081 250 0.870056 2.17514 Candidatus Xenobia bacterium 3036772 Bacteria Bacteria 83.2 1.95e-16   NR GMU54310.1 3036772 g187883 i0 48.2 0.996 83 39 97.2 2 3 245 233 313 GMU54310.1 MAG: hypothetical protein AMXMBFR33_34560 [Candidatus Xenobia bacterium] diamond 249 83.2 1 Bacteria   Bacillati Vulcanimicrobiota Candidatus Xenobia       Candidatus Xenobia bacterium
9401953 9401953 PRJNA493827_P_NODE_81748_length_381_cov_1.000000_g79550_i0 PRJNA493827 81748 381 1 3.81 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 359 1.91e-94   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g79550 i0 84.783 66.0341207349081 368 44 95 10 1 362 5031749 5031388 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 25159 359 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
13225613 13225613 PRJNA493827_P_NODE_207891_length_246_cov_0.890173_g205693_i0 PRJNA493827 207891 246 0.890173 2.18982558 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 138 9.39e-38   NR MFA5505924.1 3107663 g205693 i0 86.4 0.98780487804878 81 11 98.8 0 245 3 57 137 MFA5505924.1 3-deoxy-7-phosphoheptulonate synthase [Vulcanimicrobiota bacterium] diamond 243 138 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
32290148 32290148 PRJNA493827_P_NODE_148979_length_280_cov_2.115942_g146781_i0 PRJNA493827 148979 280 2.115942 5.9246376 Candidatus Xenobia bacterium 3036772 Bacteria Bacteria 45.4 0.00652   NR HEY4000449.1 3036772 g146781 i0 32.5 2.34642857142857 77 49 79.3 1 27 248 11 87 HEY4000449.1 protein kinase [Candidatus Xenobia bacterium] diamond 657 45.4 1 Bacteria   Bacillati Vulcanimicrobiota Candidatus Xenobia       Candidatus Xenobia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;