RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA493827" and tax_clade = "dsRNA viruses"

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tax_superkingdom 1

tax_clade 1

  • dsRNA viruses · 1 ✖

bioproject 1

  • PRJNA493827 · 1 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29413576 29413576 PRJNA493827_P_NODE_72709_length_406_cov_2.384384_g70512_i0 PRJNA493827 72709 406 2.384384 9.68059904 Bremia lactucae associated fusagravirus 1 2719799 Viruses Viruses 66.2 1.39e-9   NR QIP68010.1 2719799 g70512 i0 32.3 0.960591133004926 130 83 95.3 3 3 389 567 692 QIP68010.1 MAG: ORF2 [Bremia lactucae associated fusagravirus 1] diamond 390 66.2 1 Viruses dsRNA viruses             Bremia lactucae associated fusagravirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;