RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493827", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_clade 1

  • Pithoviruses · 3 ✖

bioproject 1

  • PRJNA493827 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27866398 27866398 PRJNA493827_P_NODE_37845_length_596_cov_4.183556_g35677_i0 PRJNA493827 37845 596 4.183556 24.93399376 Pithovirus LCPAC1 2506586 Viruses Viruses 50.4 2.1e-4   NR QBK89839.1 2506586 g35677 i0 54.1 0.186241610738255 37 17 18.6 0 465 355 2 38 QBK89839.1 MAG: SNF2 subfamily protein [Pithovirus LCPAC101] diamond 111 50.4 1 Viruses Pithoviruses             Pithovirus LCPAC101
29003676 29003676 PRJNA493827_P_NODE_75788_length_397_cov_1.817901_g73590_i0 PRJNA493827 75788 397 1.817901 7.21706697 Solumvirus sp. 2487773 Viruses Viruses 146 3.92e-41   NR AYV86227.1 2487773 g73590 i0 59.3 0.929471032745592 123 47 90.7 1 362 3 28 150 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 369 146 1 Viruses Pithoviruses             Solumvirus sp.
31182280 31182280 PRJNA493827_P_NODE_135815_length_293_cov_1.400000_g133617_i0 PRJNA493827 135815 293 1.4 4.102 Solumvirus sp. 2487773 Viruses Viruses 87.4 9.71e-19   NR AYV86227.1 2487773 g133617 i0 52.3 0.880546075085324 86 38 85 1 249 1 28 113 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 258 87.4 1 Viruses Pithoviruses             Solumvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;