RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493827", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJNA493827 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27424693 27424693 PRJNA493827_P_NODE_208263_length_246_cov_0.890173_g206065_i0 PRJNA493827 208263 246 0.890173 2.18982558 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 81.3 7.55e-16   NR MBI4641663.1 2528274 g206065 i0 51.9 0.98780487804878 81 38 98.8 1 1 243 148 227 MBI4641663.1 alanine racemase [Candidatus Tectimicrobiota bacterium] diamond 243 81.3 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
30266750 30266750 PRJNA493827_P_NODE_50492_length_502_cov_1.076923_g48302_i0 PRJNA493827 50492 502 1.076923 5.40615346 Nitrospinota bacterium 2026769 Bacteria Bacteria 184 6.839999999999999e-56   NR MDH5677730.1 2026769 g48302 i0 56.1 0.926294820717131 155 63 92 2 2 463 33 183 MDH5677730.1 tyrosine-type recombinase/integrase [Nitrospinota bacterium] diamond 465 184 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
32147327 32147327 PRJNA493827_P_NODE_134318_length_295_cov_0.936937_g132120_i0 PRJNA493827 134318 295 0.936937 2.76396415 Bacteria 2 Bacteria Bacteria 119 8.23e-31   NR MCZ6541887.1 2026769 g132120 i0 68.4 7.83050847457627 76 24 77.3 0 14 241 179 254 MCZ6541887.1 phytanoyl-CoA dioxygenase family protein [Nitrospinota bacterium] diamond 2310 119 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;