RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA493827", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 8 ✖

tax_clade 1

  • Metamonada · 8 ✖

bioproject 1

  • PRJNA493827 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22147322 22147322 PRJNA493827_P_NODE_159358_length_271_cov_1.919192_g157160_i0 PRJNA493827 159358 271 1.919192 5.20101032 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.007   NTclustered gi|2806458868|ref|XM_068503678.1| 1144522 g157160 i0 100 0.107011070110701 29 0 11 0 243 271 4418 4446 Tritrichomonas foetus uncharacterized protein (TRFO_24311), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
24696421 24696421 PRJNA493827_P_NODE_14360_length_1065_cov_84.307460_g12821_i0 PRJNA493827 14360 1065 84.30746 897.874449 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 62.1 1.8e-4   NTclustered gi|2806442743|ref|XM_068514405.1| 1144522 g12821 i0 88.462 0.0835680751173709 52 5 5 1 129 179 890 839 Tritrichomonas foetus Digestive cysteine proteinase 1 (LCP1), partial mRNA blastn 89 62.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
26823799 26823799 PRJNA493827_P_NODE_21241_length_842_cov_1.668401_g19437_i0 PRJNA493827 21241 842 1.668401 14.04793642 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 47.8 0.0294   NR XP_001316445.1 412133 g19437 i0 67.9 0.0997624703087886 28 9 10 0 727 644 176 203 XP_001316445.1 phosphoprotein phosphatase protein [Trichomonas vaginalis G3] diamond 84 47.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27740528 27740528 PRJNA493827_P_NODE_214064_length_245_cov_0.895349_g211866_i0 PRJNA493827 214064 245 0.895349 2.19360505 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 101 1.3399999999999999e-25   NR XP_067769820.1 135588 g211866 i0 67.2 0.820408163265306 67 22 82 0 242 42 46 112 XP_067769820.1 uncharacterized protein GO595_009871 [Histomonas meleagridis] diamond 201 101 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27929646 27929646 PRJNA493827_P_NODE_168345_length_264_cov_1.141361_g166147_i0 PRJNA493827 168345 264 1.141361 3.01319304 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 57 3.71e-7   NR XP_001581059.1 412133 g166147 i0 47.3 0.625 55 29 62.5 0 16 180 180 234 XP_001581059.1 ribosome biogenesis [Trichomonas vaginalis G3] diamond 165 57 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29034970 29034970 PRJNA493827_P_NODE_29768_length_687_cov_2.188925_g27712_i0 PRJNA493827 29768 687 2.188925 15.03791475 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 47 0.0333   NR XP_068351030.1 1144522 g27712 i0 47.5 0.174672489082969 40 21 17.5 0 144 25 93 132 XP_068351030.1 uncharacterized protein TRFO_35796 [Tritrichomonas foetus] diamond 120 47 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29192717 29192717 PRJNA493827_P_NODE_178809_length_255_cov_1.428571_g176611_i0 PRJNA493827 178809 255 1.428571 3.64285605 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 81.6 5.06e-17   NR XP_068360038.1 1144522 g176611 i0 50.6 0.952941176470588 81 40 95.3 0 253 11 97 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 243 81.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29602726 29602726 PRJNA493827_P_NODE_216150_length_244_cov_1.573099_g213952_i0 PRJNA493827 216150 244 1.573099 3.83836156 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 46.2 0.00233   NR XP_001579467.1 412133 g213952 i0 45.7 1.14344262295082 46 25 56.6 0 201 64 700 745 XP_001579467.1 PHOSPHATIDYLINOSITOL KINASE family [Trichomonas vaginalis G3] diamond 279 46.2 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;