RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493827", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA493827 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1749182 1749182 PRJNA493827_P_NODE_93982_length_354_cov_1.096085_g91784_i0 PRJNA493827 93982 354 1.096085 3.8801409 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 152 5.29e-43   NR HZN51065.1 2072417 g91784 i0 70.2 0.966101694915254 114 34 96.6 0 1 342 92 205 HZN51065.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Methylomirabilota bacterium] diamond 342 152 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29050552 29050552 PRJNA493827_P_NODE_229388_length_242_cov_0.911243_g227190_i0 PRJNA493827 229388 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 48.1 1.42e-4   NR HYT42866.1 2072417 g227190 i0 55.8 1.09090909090909 43 19 53.3 0 230 102 81 123 HYT42866.1 KOW motif-containing protein [Candidatus Methylomirabilota bacterium] diamond 264 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32857853 32857853 PRJNA493827_P_NODE_153020_length_277_cov_1.284314_g150822_i0 PRJNA493827 153020 277 1.284314 3.55754978 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 108 3.06e-26   NR MBP1776891.1 2072417 g150822 i0 67 0.985559566787004 91 30 98.6 0 3 275 56 146 MBP1776891.1 azoreductase [Candidatus Methylomirabilota bacterium] diamond 273 108 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;