RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA493827", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 9 ✖

tax_clade 1

  • Bacteria candidate phyla · 9 ✖

bioproject 1

  • PRJNA493827 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26728260 26728260 PRJNA493827_P_NODE_94561_length_353_cov_0.925000_g92363_i0 PRJNA493827 94561 353 0.925 3.26525 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 65.5 3.12e-10   NR MFQ5540433.1 2838779 g92363 i0 36 0.943342776203966 111 62 93.5 4 2 331 14 116 MFQ5540433.1 NIF family HAD-type phosphatase [Candidatus Binatia bacterium] diamond 333 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27234857 27234857 PRJNA493827_P_NODE_234883_length_241_cov_0.916667_g232685_i0 PRJNA493827 234883 241 0.916667 2.20916747 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 72.4 4.45e-13   NR MFN2427245.1 2838779 g232685 i0 53.2 3.97095435684647 79 37 98.3 0 238 2 5 83 MFN2427245.1 cytochrome c oxidase assembly protein [Candidatus Binatia bacterium] diamond 957 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28340077 28340077 PRJNA493827_P_NODE_184666_length_251_cov_0.865169_g182468_i0 PRJNA493827 184666 251 0.865169 2.17157419 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 121 5.2499999999999996e-31   NR HEX3408796.1 2785449 g182468 i0 68.7 1.9840637450199201 83 26 99.2 0 3 251 100 182 HEX3408796.1 restriction endonuclease, SacI family [Candidatus Binataceae bacterium] diamond 498 121 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
28592807 28592807 PRJNA493827_P_NODE_223927_length_243_cov_0.905882_g221729_i0 PRJNA493827 223927 243 0.905882 2.20129326 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 58.2 5.12e-9   NR MCX8072107.1 2838779 g221729 i0 45.7 3.69135802469136 70 38 86.4 0 230 21 1 70 MCX8072107.1 tetratricopeptide repeat protein [Candidatus Binatia bacterium] diamond 897 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29161244 29161244 PRJNA493827_P_NODE_191489_length_250_cov_0.870056_g189291_i0 PRJNA493827 191489 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.7 0.00877   NR HMJ65514.1 2838779 g189291 i0 41.1 0.672 56 28 67.2 1 7 174 121 171 HMJ65514.1 hypothetical protein [Candidatus Binatia bacterium] diamond 168 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30314162 30314162 PRJNA493827_P_NODE_170492_length_262_cov_1.349206_g168294_i0 PRJNA493827 170492 262 1.349206 3.53491972 Pseudomonadati 3379134 Bacteria Bacteria 45.8 0.00389   NR MFN8601516.1 2838779 g168294 i0 35.3 4.79770992366412 85 50 95 2 14 262 213 294 MFN8601516.1 M35 family metallo-endopeptidase [Candidatus Binatia bacterium] diamond 1257 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30330068 30330068 PRJNA493827_P_NODE_198532_length_248_cov_0.880000_g196334_i0 PRJNA493827 198532 248 0.88 2.1824 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 70.1 8.82e-12   NR MCK6556646.1 2838779 g196334 i0 45 2.93951612903226 80 42 96.8 1 6 245 92 169 MCK6556646.1 EH signature domain-containing protein [Candidatus Binatia bacterium] diamond 729 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31213826 31213826 PRJNA493827_P_NODE_229035_length_242_cov_0.911243_g226837_i0 PRJNA493827 229035 242 0.911243 2.20520806 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 78.2 1.22e-14   NR HEY2989151.1 2838779 g226837 i0 49.3 0.830578512396694 67 34 83.1 0 242 42 485 551 HEY2989151.1 hypothetical protein [Candidatus Binatia bacterium] diamond 201 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32747584 32747584 PRJNA493827_P_NODE_200340_length_248_cov_0.880000_g198142_i0 PRJNA493827 200340 248 0.88 2.1824 Pseudomonadati 3379134 Bacteria Bacteria 44.3 0.00267   NR HEX4990593.1 2838779 g198142 i0 76 1.57258064516129 25 6 30.2 0 247 173 81 105 HEX4990593.1 quaternary ammonium compound efflux SMR transporter SugE [Candidatus Binatia bacterium] diamond 390 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;