RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA493632" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3651875 3651875 PRJNA493632_P_NODE_167463_length_370_cov_1.562290_g164037_i0 PRJNA493632 167463 370 1.56229 5.780473 root 1 Root_unresolved Root_unresolved 65.8 4.52e-6   NTclustered gi|2241586122|emb|LR994533.1| 10376 g164037 i0 97.368 29.9189189189189 38 1 10 0 310 347 103808 103771 Human gammaherpesvirus 4 genome assembly, plasmid: 1 blastn 11070 65.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
10670749 10670749 PRJNA493632_P_NODE_618149_length_243_cov_7.788235_g614708_i0 PRJNA493632 618149 243 7.788235 18.92541105 Vulture herpesvirus 285986 Viruses Viruses 52.8 0.022   NTclustered gi|50593442|gb|AY571855.1| 285986 g614708 i0 100 0.11522633744856 28 0 12 0 90 117 951 924 Vulture herpesvirus clone 1 nonfunctional DNA helicase-primase component (UL5) gene, partial sequence blastn 28 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae   Vulture herpesvirus
15766966 15766966 PRJNA493632_P_NODE_459713_length_260_cov_1.438503_g456274_i0 PRJNA493632 459713 260 1.438503 3.7401078 Gallid herpesvirus 39566 Viruses Viruses 470 5.519999999999998e-128   NTclustered gi|1434153459|gb|L41561.2|MDVFRA 39566 g456274 i0 99.231 158.419230769231 260 2 100 0 1 260 33 292 Gallid herpesvirus mRNA fragment blastn 41189 470 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales     Gallid herpesvirus
19588113 19588113 PRJNA493632_P_NODE_344456_length_284_cov_1.473934_g341017_i0 PRJNA493632 344456 284 1.473934 4.18597256 Vulture herpesvirus 285986 Viruses Viruses 54.7 0.007   NTclustered gi|50593442|gb|AY571855.1| 285986 g341017 i0 100 0.102112676056338 29 0 10 0 213 241 927 955 Vulture herpesvirus clone 1 nonfunctional DNA helicase-primase component (UL5) gene, partial sequence blastn 29 54.7 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae   Vulture herpesvirus
24055501 24055501 PRJNA493632_P_NODE_606099_length_244_cov_1.807018_g602658_i0 PRJNA493632 606099 244 1.807018 4.40912392 root 1 Root_unresolved Root_unresolved 449 6.68e-122   NTclustered gi|108865008|gb|DQ534537.1| 10390 g602658 i0 100 165.377049180328 243 0 99 0 2 244 12365 12607 Gallid herpesvirus 2 isolate CU-2 internal repeat long region, partial sequence blastn 40352 449 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Mardivirus Mardivirus gallidalpha2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;