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contig_metadata

30 rows where bioproject = "PRJNA493632" and tax_phylum = "Nitrososphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 30 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 30 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
463724 463724 PRJNA493632_P_NODE_42621_length_648_cov_0.998261_g39453_i0 PRJNA493632 42621 648 0.998261 6.46873128 Nitrosopumilus sp. 2024843 Archaea Archaea 345 1.29e-111   NR MCI4432151.1 2024843 g39453 i0 77.2 0.99537037037037 215 49 99.5 0 2 646 181 395 MCI4432151.1 DDE-type integrase/transposase/recombinase [Nitrosopumilus sp.] diamond 645 345 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
5570451 5570451 PRJNA493632_P_NODE_607585_length_244_cov_1.526316_g604144_i0 PRJNA493632 607585 244 1.526316 3.72421104 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 435 1.87e-117   NTclustered gi|808354332|gb|CP011097.2| 1603555 g604144 i0 98.77 1 244 3 100 0 1 244 1446928 1446685 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 244 435 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
6207538 6207538 PRJNA493632_P_NODE_72165_length_520_cov_1.098434_g68812_i0 PRJNA493632 72165 520 1.098434 5.7118568 Nitrosopumilus sp. 2024843 Archaea Archaea 243 3.2e-73   NR MCI4432151.1 2024843 g68812 i0 72.5 0.859615384615385 149 41 86 0 519 73 531 679 MCI4432151.1 DDE-type integrase/transposase/recombinase [Nitrosopumilus sp.] diamond 447 243 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
6846314 6846314 PRJNA493632_P_NODE_716746_length_213_cov_14.185714_g713304_i0 PRJNA493632 716746 213 14.185714 30.21557082 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 388 1.26e-103   NTclustered gi|808354332|gb|CP011097.2| 1603555 g713304 i0 99.531 1 213 1 100 0 1 213 1245443 1245655 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 213 388 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
22142746 22142746 PRJNA493632_P_NODE_573538_length_247_cov_0.873563_g570099_i0 PRJNA493632 573538 247 0.873563 2.15770061 Candidatus Nitrosopumilus koreensis 1510466 Archaea Archaea 84.2 7.92e-12   NTclustered gi|407045174|gb|CP003842.1| 1229908 g570099 i0 96.078 59.3643724696356 51 2 21 0 157 207 1345938 1345988 Candidatus Nitrosopumilus koreensis AR1, complete genome blastn 14663 84.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Candidatus Nitrosopumilus koreensis
26601475 26601475 PRJNA493632_P_NODE_379721_length_276_cov_2.738916_g376282_i0 PRJNA493632 379721 276 2.738916 7.55940816 Nitrososphaera sp. 1971748 Archaea Archaea 176 1.9e-53   NR HEU0144883.1 1971748 g376282 i0 92.3 1.98913043478261 91 7 98.9 0 2 274 39 129 HEU0144883.1 MBL fold metallo-hydrolase [Nitrososphaera sp.] diamond 549 176 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
27266201 27266201 PRJNA493632_P_NODE_211903_length_337_cov_1.458333_g208468_i0 PRJNA493632 211903 337 1.458333 4.91458221 Nitrosopumilus sp. 2024843 Archaea Archaea 142 2.1e-40   NR MCI4432148.1 2024843 g208468 i0 61.6 0.997032640949555 112 42 99.7 1 336 1 35 145 MCI4432148.1 hypothetical protein [Nitrosopumilus sp.] diamond 336 142 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
27455937 27455937 PRJNA493632_P_NODE_230563_length_325_cov_2.571429_g227127_i0 PRJNA493632 230563 325 2.571429 8.35714425 uncultured marine thaumarchaeote KM3_53_F 1167203 Archaea Archaea 81.3 1.66e-17   NR AIF11849.1 1456186 g227127 i0 78.7 0.433846153846154 47 10 43.4 0 2 142 47 93 AIF11849.1 hypothetical protein [uncultured marine thaumarchaeote KM3_53_F08] diamond 141 81.3 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote KM3_53_F08
27929521 27929521 PRJNA493632_P_NODE_580725_length_246_cov_0.890173_g577284_i0 PRJNA493632 580725 246 0.890173 2.18982558 Nitrososphaera sp. 1971748 Archaea Archaea 142 1.98e-39   NR HXG07201.1 1971748 g577284 i0 81.5 1.97560975609756 81 15 98.8 0 246 4 53 133 HXG07201.1 zinc metalloprotease HtpX [Nitrososphaera sp.] diamond 486 142 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
28087159 28087159 PRJNA493632_P_NODE_338245_length_285_cov_2.641509_g334806_i0 PRJNA493632 338245 285 2.641509 7.52830065 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 170 1.07e-46   NR MDF2782985.1 2169593 g334806 i0 96.8 2 95 3 100 0 285 1 813 907 MDF2782985.1 alaS [Nitrososphaeraceae archaeon] diamond 570 170 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
28102986 28102986 PRJNA493632_P_NODE_370465_length_278_cov_2.614634_g367026_i0 PRJNA493632 370465 278 2.614634 7.26868252 Thermoproteati 1783275 Archaea Archaea 178 4.509999999999999e-55   NR MBD0298916.1 1971748 g367026 i0 93.3 2.94604316546763 89 6 96 0 269 3 1 89 MBD0298916.1 Rieske 2Fe-2S domain-containing protein [Nitrososphaera sp.] diamond 819 179 0.994413407821229 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
28434655 28434655 PRJNA493632_P_NODE_436206_length_264_cov_4.628272_g432767_i0 PRJNA493632 436206 264 4.628272 12.21863808 Nitrososphaera sp. 1971748 Archaea Archaea 46.2 1.67e-4   NR MCI0563943.1 1971748 g432767 i0 85.7 0.318181818181818 28 4 31.8 0 86 3 1 28 MCI0563943.1 DUF3096 domain-containing protein [Nitrososphaera sp.] diamond 84 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
28624364 28624364 PRJNA493632_P_NODE_633527_length_242_cov_4.017751_g630086_i0 PRJNA493632 633527 242 4.017751 9.72295742 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 55.5 4.12e-8   NR HZO11211.1 2169593 g630086 i0 59 0.483471074380165 39 16 48.3 0 9 125 25 63 HZO11211.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 117 55.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
28876563 28876563 PRJNA493632_P_NODE_34988_length_705_cov_0.901899_g31957_i0 PRJNA493632 34988 705 0.901899 6.35838795 Nitrosopumilus sp. 2024843 Archaea Archaea 228 3.2e-66   NR MCI4432151.1 2024843 g31957 i0 82.3 0.527659574468085 124 22 52.8 0 334 705 83 206 MCI4432151.1 DDE-type integrase/transposase/recombinase [Nitrosopumilus sp.] diamond 372 228 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
29034750 29034750 PRJNA493632_P_NODE_416028_length_269_cov_1.178571_g412589_i0 PRJNA493632 416028 269 1.178571 3.17035599 Nitrosopumilus sp. 2024843 Archaea Archaea 108 1.4e-27   NR MCI4432150.1 2024843 g412589 i0 62.9 0.992565055762082 89 33 99.3 0 3 269 19 107 MCI4432150.1 retroviral-like aspartic protease [Nitrosopumilus sp.] diamond 267 108 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
29034845 29034845 PRJNA493632_P_NODE_660988_length_241_cov_0.916667_g657547_i0 PRJNA493632 660988 241 0.916667 2.20916747 Nitrosopumilus sp. 2024843 Archaea Archaea 65.1 1.09e-10   NR MCI4432150.1 2024843 g657547 i0 49.3 0.83402489626556 67 34 83.4 0 40 240 3 69 MCI4432150.1 retroviral-like aspartic protease [Nitrosopumilus sp.] diamond 201 65.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
29192613 29192613 PRJNA493632_P_NODE_661929_length_241_cov_0.904762_g658488_i0 PRJNA493632 661929 241 0.904762 2.18047642 Nitrosopumilus sp. 2024843 Archaea Archaea 59.3 5.3e-8   NR MCI4432151.1 2024843 g658488 i0 59.5 0.522821576763486 42 17 52.3 0 104 229 176 217 MCI4432151.1 DDE-type integrase/transposase/recombinase [Nitrosopumilus sp.] diamond 126 59.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
29381786 29381786 PRJNA493632_P_NODE_294069_length_298_cov_0.973333_g290632_i0 PRJNA493632 294069 298 0.973333 2.90053234 Nitrosopumilus sp. 2024843 Archaea Archaea 73.2 1.24e-13   NR MCI4432148.1 2024843 g290632 i0 60 0.503355704697987 50 20 50.3 0 1 150 125 174 MCI4432148.1 hypothetical protein [Nitrosopumilus sp.] diamond 150 73.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
29934683 29934683 PRJNA493632_P_NODE_708811_length_221_cov_8.216216_g705369_i0 PRJNA493632 708811 221 8.216216 18.15783736 Thermoproteati 1783275 Archaea Archaea 60.5 1.54e-8   NR WP_172602136.1 1798806 g705369 i0 96.7 3.66515837104072 30 1 40.7 0 1 90 287 316 WP_172602136.1 GH116 family glycosyl hydrolase [Candidatus Nitrosocosmicus franklandus] diamond 810 60.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus franklandianus
29950251 29950251 PRJNA493632_P_NODE_360331_length_280_cov_5.231884_g356892_i0 PRJNA493632 360331 280 5.231884 14.6492752 Nitrosopumilus sp. 2024843 Archaea Archaea 132 1.83e-33   NR MDH3384944.1 2024843 g356892 i0 67 0.975 91 30 97.5 0 7 279 319 409 MDH3384944.1 hypothetical protein [Nitrosopumilus sp.] diamond 273 132 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
30771932 30771932 PRJNA493632_P_NODE_597054_length_245_cov_0.895349_g593613_i0 PRJNA493632 597054 245 0.895349 2.19360505 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 46.6 7.05e-4   NR HJU79928.1 2169593 g593613 i0 30 0.73469387755102 60 40 73.5 1 60 239 56 113 HJU79928.1 RidA family protein [Nitrososphaeraceae archaeon] diamond 180 46.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31118968 31118968 PRJNA493632_P_NODE_50915_length_601_cov_1.304924_g47677_i0 PRJNA493632 50915 601 1.304924 7.84259324 Nitrosopumilus sp. 2024843 Archaea Archaea 124 8.01e-29   NR MCI4432151.1 2024843 g47677 i0 45.3 0.584026622296173 117 64 58.4 0 351 1 465 581 MCI4432151.1 DDE-type integrase/transposase/recombinase [Nitrosopumilus sp.] diamond 351 124 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31245643 31245643 PRJNA493632_P_NODE_439455_length_264_cov_1.497382_g436016_i0 PRJNA493632 439455 264 1.497382 3.95308848 Nitrosopumilus sp. 2024843 Archaea Archaea 109 1.79e-25   NR MCI4432151.1 2024843 g436016 i0 58.1 1.89772727272727 86 36 97.7 0 259 2 293 378 MCI4432151.1 DDE-type integrase/transposase/recombinase [Nitrosopumilus sp.] diamond 501 109 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31277270 31277270 PRJNA493632_P_NODE_595475_length_245_cov_0.895349_g592034_i0 PRJNA493632 595475 245 0.895349 2.19360505 Conexivisphaerales archaeon 2910431 Archaea Archaea 54.3 3.04e-6   NR MEM3830042.1 2910431 g592034 i0 37.5 0.783673469387755 64 40 78.4 0 236 45 94 157 MEM3830042.1 glycosyltransferase [Conexivisphaerales archaeon] diamond 192 54.3 1 Archaea   Thermoproteati Nitrososphaerota Conexivisphaeria Conexivisphaerales     Conexivisphaerales archaeon
31308822 31308822 PRJNA493632_P_NODE_300055_length_295_cov_5.004505_g296617_i0 PRJNA493632 300055 295 5.004505 14.76328975 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 46.6 0.00302   NR MDW0176719.1 2169593 g296617 i0 67.7 0.315254237288136 31 10 31.5 0 138 230 830 860 MDW0176719.1 reverse transcriptase family protein [Nitrososphaeraceae archaeon] diamond 93 46.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31435380 31435380 PRJNA493632_P_NODE_521956_length_250_cov_0.870056_g518517_i0 PRJNA493632 521956 250 0.870056 2.17514 Nitrosopumilus sp. 2024843 Archaea Archaea 49.7 6.74e-5   NR MCI4432148.1 2024843 g518517 i0 82.8 0.348 29 5 34.8 0 5 91 83 111 MCI4432148.1 hypothetical protein [Nitrosopumilus sp.] diamond 87 49.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31451431 31451431 PRJNA493632_P_NODE_468736_length_258_cov_1.664865_g465297_i0 PRJNA493632 468736 258 1.664865 4.2953517 root 1 Root_unresolved Root_unresolved 105 2.79e-26   NR HEY9485707.1 2169593 g465297 i0 58.8 1.86046511627907 85 32 98.8 1 257 3 48 129 HEY9485707.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 480 106 0.990566037735849 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32004858 32004858 PRJNA493632_P_NODE_406758_length_271_cov_0.984848_g403319_i0 PRJNA493632 406758 271 0.984848 2.66893808 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 77 2.52e-15   NR HYP42904.1 2109671 g403319 i0 39.8 0.974169741697417 88 53 97.4 0 2 265 12 99 HYP42904.1 retropepsin-like aspartic protease [Candidatus Nitrosocosmicus sp.] diamond 264 77 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
32448163 32448163 PRJNA493632_P_NODE_732639_length_198_cov_6.664000_g729196_i0 PRJNA493632 732639 198 6.664 13.19472 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 98.2 1.67e-23   NR MDW0150574.1 2169593 g729196 i0 93.8 1.45454545454545 48 3 72.7 0 145 2 1 48 MDW0150574.1 MBL fold metallo-hydrolase [Nitrososphaeraceae archaeon] diamond 288 98.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32700068 32700068 PRJNA493632_P_NODE_228040_length_327_cov_1.212598_g224604_i0 PRJNA493632 228040 327 1.212598 3.96519546 Nitrosopumilus sp. 2024843 Archaea Archaea 157 4.42e-42   NR MCI4432151.1 2024843 g224604 i0 72.2 0.990825688073395 108 30 99.1 0 326 3 414 521 MCI4432151.1 DDE-type integrase/transposase/recombinase [Nitrosopumilus sp.] diamond 324 157 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;