RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where bioproject = "PRJNA493632" and tax_phylum = "Duplornaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 28 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 28 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
458732 458732 PRJNA493632_P_NODE_152821_length_383_cov_5.100000_g149397_i0 PRJNA493632 152821 383 5.1 19.533 Reoviridae sp. 2585267 Viruses Viruses 189 2.669999999999999e-43   NTclustered gi|2171145380|gb|MZ218366.1| 2585267 g149397 i0 81.673 28.1853785900783 251 25 61 10 128 361 34 280 MAG: Reoviridae sp. isolate R66-k141_282067 segment 2 genomic sequence blastn 10795 189 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Reoviridae sp.
458818 458818 PRJNA493632_P_NODE_157561_length_379_cov_1.686275_g154137_i0 PRJNA493632 157561 379 1.686275 6.39098225 Scylla paramamosain reovirus 1226329 Viruses Viruses 695 0   NTclustered gi|2588331567|gb|OP455959.1| 1226329 g154137 i0 100 2.97625329815303 376 0 99 0 4 379 2678 2303 Scylla paramamosain reovirus isolate NH-2021 segment 3, complete sequence blastn 1128 695 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Scylla paramamosain reovirus
1743255 1743255 PRJNA493632_P_NODE_694642_length_229_cov_3.256410_g691201_i0 PRJNA493632 694642 229 3.25641 7.4571789 Fusarium nanum alternavirus 1 3021227 Viruses Viruses 324 3.92e-84   NTclustered gi|2423789230|gb|OK318882.1| 3021227 g691201 i0 92.14 3.00873362445415 229 18 100 0 1 229 865 637 Fusarium nanum alternavirus 1 isolate F1 segment RNA3, complete sequence blastn 689 324 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Alternaviridae Alternavirus Fusarium nanum alternavirus 1
1743680 1743680 PRJNA493632_P_NODE_718542_length_211_cov_86.347826_g715100_i0 PRJNA493632 718542 211 86.347826 182.19391286 Dali Totiv tick virus 1 2972361 Viruses Viruses 156 1.37e-33   NTclustered gi|2320153256|gb|ON746559.1| 2972361 g715100 i0 84.967 2.17535545023697 153 23 73 0 59 211 4524 4372 MAG: Dali Totiv tick virus 1 isolate TIGMIC 5 genomic sequence blastn 459 156 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Dali Totiv tick virus 1
1743846 1743846 PRJNA493632_P_NODE_727902_length_203_cov_4.192308_g724459_i0 PRJNA493632 727902 203 4.192308 8.51038524 Crabreovirus scylla 3428106 Viruses Viruses 372 1.2e-98   NTclustered gi|353256076|gb|HQ414136.1| 458682 g724459 i0 100 2.97044334975369 201 0 99 0 1 201 991 791 Scylla serrata reovirus SZ-2007 segment 10, complete sequence blastn 603 372 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
2378531 2378531 PRJNA493632_P_NODE_501882_length_251_cov_4.101124_g498443_i0 PRJNA493632 501882 251 4.101124 10.29382124 Crabreovirus 3425084 Viruses Viruses 464 2.47e-126   NTclustered gi|381142077|gb|JQ287703.1| 458682 g498443 i0 100 3 251 0 100 0 1 251 353 603 Scylla serrata reovirus SZ-2007 isolate SM09 segment 4, complete sequence blastn 753 464 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
3018232 3018232 PRJNA493632_P_NODE_640623_length_242_cov_0.911243_g637182_i0 PRJNA493632 640623 242 0.911243 2.20520806 Scylla paramamosain reovirus 1226329 Viruses Viruses 442 1.1099999999999995e-119   NTclustered gi|2588331567|gb|OP455959.1| 1226329 g637182 i0 99.587 3 242 1 100 0 1 242 487 246 Scylla paramamosain reovirus isolate NH-2021 segment 3, complete sequence blastn 726 442 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Scylla paramamosain reovirus
3652478 3652478 PRJNA493632_P_NODE_238143_length_321_cov_1.370968_g234707_i0 PRJNA493632 238143 321 1.370968 4.40080728 Crabreovirus 3425084 Viruses Viruses 582 8.639999999999997e-162   NTclustered gi|353256060|gb|HQ414128.1| 458682 g234707 i0 99.377 3 321 2 100 0 1 321 2290 1970 Scylla serrata reovirus SZ-2007 segment 2, complete sequence blastn 963 582 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
4295017 4295017 PRJNA493632_P_NODE_683064_length_233_cov_4.368750_g679623_i0 PRJNA493632 683064 233 4.36875 10.1791875 Crabreovirus scylla 3428106 Viruses Viruses 431 2.2899999999999996e-116   NTclustered gi|353256062|gb|HQ414129.1| 458682 g679623 i0 100 2.99141630901288 233 0 100 0 1 233 808 1040 Scylla serrata reovirus SZ-2007 segment 3, complete sequence blastn 697 431 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
4929012 4929012 PRJNA493632_P_NODE_182644_length_358_cov_0.785965_g179216_i0 PRJNA493632 182644 358 0.785965 2.8137547 Crabreovirus 3425084 Viruses Viruses 651 0   NTclustered gi|381142079|gb|JQ287704.1| 458682 g179216 i0 99.441 3 358 2 100 0 1 358 882 525 Scylla serrata reovirus SZ-2007 isolate SM09 segment 5, complete sequence blastn 1074 651 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
8756371 8756371 PRJNA493632_P_NODE_575867_length_246_cov_2.404624_g572426_i0 PRJNA493632 575867 246 2.404624 5.91537504 Crabreovirus 3425084 Viruses Viruses 449 6.74e-122   NTclustered gi|353256066|gb|HQ414131.1| 458682 g572426 i0 99.593 3 246 1 100 0 1 246 362 117 Scylla serrata reovirus SZ-2007 segment 5, complete sequence blastn 738 449 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
9388164 9388164 PRJNA493632_P_NODE_239228_length_320_cov_2.404858_g235792_i0 PRJNA493632 239228 320 2.404858 7.6955456 Scylla paramamosain reovirus 1226329 Viruses Viruses 575 1.44e-159   NTclustered gi|2588331470|gb|OP455957.1| 1226329 g235792 i0 99.062 3.3625 320 3 100 0 1 320 3021 2702 Scylla paramamosain reovirus isolate NH-2021 segment 1, complete sequence blastn 1076 575 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Scylla paramamosain reovirus
9388695 9388695 PRJNA493632_P_NODE_267288_length_310_cov_2.396624_g263852_i0 PRJNA493632 267288 310 2.396624 7.4295344 Crabreovirus scylla 3428106 Viruses Viruses 278 4.39e-70   NTclustered gi|353256064|gb|HQ414130.1| 458682 g263852 i0 100 2.90322580645161 150 0 97 0 161 310 867 718 Scylla serrata reovirus SZ-2007 segment 4, complete sequence blastn 900 278 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
11303425 11303425 PRJNA493632_P_NODE_106049_length_444_cov_1.611860_g102642_i0 PRJNA493632 106049 444 1.61186 7.1566584 Crabreovirus 3425084 Viruses Viruses 809 0   NTclustered gi|381142077|gb|JQ287703.1| 458682 g102642 i0 99.55 3.86936936936937 444 2 100 0 1 444 1600 2043 Scylla serrata reovirus SZ-2007 isolate SM09 segment 4, complete sequence blastn 1718 809 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
13216933 13216933 PRJNA493632_P_NODE_400551_length_272_cov_1.492462_g397112_i0 PRJNA493632 400551 272 1.492462 4.05949664 Crabreovirus scylla 3428106 Viruses Viruses 497 2.67e-136   NTclustered gi|353256062|gb|HQ414129.1| 458682 g397112 i0 99.632 3.61764705882353 272 1 100 0 1 272 1627 1898 Scylla serrata reovirus SZ-2007 segment 3, complete sequence blastn 984 497 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
15129592 15129592 PRJNA493632_P_NODE_274492_length_307_cov_3.294872_g271056_i0 PRJNA493632 274492 307 3.294872 10.11525704 Crabreovirus 3425084 Viruses Viruses 562 1.07e-155   NTclustered gi|317018054|gb|HM807276.1| 458682 g271056 i0 99.674 3 307 1 100 0 1 307 291 597 Scylla serrata reovirus SZ-2007 isolate SM09 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 921 562 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
15765491 15765491 PRJNA493632_P_NODE_379013_length_276_cov_4.280788_g375574_i0 PRJNA493632 379013 276 4.280788 11.81497488 Crabreovirus scylla 3428106 Viruses Viruses 505 1.62e-138   NTclustered gi|317018060|gb|HM807279.1| 458682 g375574 i0 99.638 3 276 1 100 0 1 276 737 1012 Scylla serrata reovirus SZ-2007 isolate SM09 segment 7 hypothetical protein gene, complete cds blastn 828 505 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
15770720 15770720 PRJNA493632_P_NODE_680793_length_234_cov_3.291925_g677352_i0 PRJNA493632 680793 234 3.291925 7.7031045 Crabreovirus scylla 3428106 Viruses Viruses 427 2.9799999999999993e-115   NTclustered gi|353256062|gb|HQ414129.1| 458682 g677352 i0 99.573 3 234 1 100 0 1 234 2002 2235 Scylla serrata reovirus SZ-2007 segment 3, complete sequence blastn 702 427 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
16403379 16403379 PRJNA493632_P_NODE_178913_length_360_cov_3.825784_g175485_i0 PRJNA493632 178913 360 3.825784 13.7728224 Crabreovirus 3425084 Viruses Viruses 665 0   NTclustered gi|353256060|gb|HQ414128.1| 458682 g175485 i0 100 4.01111111111111 360 0 100 0 1 360 731 372 Scylla serrata reovirus SZ-2007 segment 2, complete sequence blastn 1444 665 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
20226732 20226732 PRJNA493632_P_NODE_108836_length_439_cov_2.035519_g105427_i0 PRJNA493632 108836 439 2.035519 8.93592841 Crabreovirus 3425084 Viruses Viruses 811 0   NTclustered gi|381142083|gb|JQ287706.1| 458682 g105427 i0 100 3 439 0 100 0 1 439 456 18 Scylla serrata reovirus SZ-2007 isolate SM09 segment 8, complete sequence blastn 1317 811 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
20228825 20228825 PRJNA493632_P_NODE_389616_length_274_cov_2.184080_g386177_i0 PRJNA493632 389616 274 2.18408 5.9843792 Crabreovirus 3425084 Viruses Viruses 501 2.08e-137   NTclustered gi|317018054|gb|HM807276.1| 458682 g386177 i0 99.635 3 274 1 100 0 1 274 1435 1162 Scylla serrata reovirus SZ-2007 isolate SM09 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 822 501 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
20229837 20229837 PRJNA493632_P_NODE_560376_length_247_cov_3.091954_g556937_i0 PRJNA493632 560376 247 3.091954 7.63712638 Crabreovirus 3425084 Viruses Viruses 457 4.05e-124   NTclustered gi|353256080|gb|HQ414138.1| 458682 g556937 i0 100 3 247 0 100 0 1 247 636 882 Scylla serrata reovirus SZ-2007 segment 12, complete sequence blastn 741 457 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
20870324 20870324 PRJNA493632_P_NODE_71077_length_523_cov_1.851111_g67726_i0 PRJNA493632 71077 523 1.851111 9.68131053 Crabreovirus scylla 3428106 Viruses Viruses 773 0   NTclustered gi|381142085|gb|JQ287707.1| 458682 g67726 i0 99.762 2.56405353728489 421 1 80 0 28 448 240 660 Scylla serrata reovirus SZ-2007 isolate SM09 segment 9, complete sequence blastn 1341 773 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
22139127 22139127 PRJNA493632_P_NODE_370338_length_278_cov_2.741463_g366899_i0 PRJNA493632 370338 278 2.741463 7.62126714 Orbivirus magninsulae 3431249 Viruses Viruses 58.4 5.5e-4   NTclustered gi|2672713167|gb|OR645559.1| 881914 g366899 i0 94.737 0.26978417266187 38 1 13 1 242 278 38 1 MAG: Tribec virus isolate Romania segment 7, complete sequence blastn 75 58.4 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus magninsulae
22779662 22779662 PRJNA493632_P_NODE_420438_length_268_cov_1.338462_g416999_i0 PRJNA493632 420438 268 1.338462 3.58707816 Crabreovirus 3425084 Viruses Viruses 496 9.429999999999999e-136   NTclustered gi|353256060|gb|HQ414128.1| 458682 g416999 i0 100 3 268 0 100 0 1 268 1964 1697 Scylla serrata reovirus SZ-2007 segment 2, complete sequence blastn 804 496 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Crabreovirus Crabreovirus scylla
24687209 24687209 PRJNA493632_P_NODE_297320_length_296_cov_3.914798_g293882_i0 PRJNA493632 297320 296 3.9147979999999998 11.58780208 Orbivirus magninsulae 3431249 Viruses Viruses 60.2 1.64e-4   NTclustered gi|2672713159|gb|OR645555.1| 881914 g293882 i0 94.872 0.260135135135135 39 1 13 1 259 296 1934 1972 MAG: Tribec virus isolate Romania segment 3, complete sequence blastn 77 60.2 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus magninsulae
28845015 28845015 PRJNA493632_P_NODE_691168_length_230_cov_4.592357_g687727_i0 PRJNA493632 691168 230 4.592357 10.5624211 Puccinia striiformis totivirus 1 2045189 Viruses Viruses 141 4.979999999999999e-37   NR ATO91006.1 2045189 g687727 i0 92.1 0.991304347826087 76 6 99.1 0 230 3 100 175 ATO91006.1 putative capsid protein [Puccinia striiformis totivirus 1] diamond 228 141 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Puccinia striiformis totivirus 1
32763260 32763260 PRJNA493632_P_NODE_536820_length_249_cov_0.875000_g533381_i0 PRJNA493632 536820 249 0.875 2.17875 Hubei toti-like virus 18 1923306 Viruses Viruses 94.7 2.05e-20   NR YP_009336931.1 1923306 g533381 i0 56.3 0.963855421686747 80 35 96.4 0 8 247 1480 1559 YP_009336931.1 hypothetical protein 1 [Hubei toti-like virus 18] diamond 240 94.7 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Lebotiviridae Lebotivirus Lebotivirus roku

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;