RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA493632" and tax_phylum = "Cressdnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3016144 3016144 PRJNA493632_P_NODE_51663_length_597_cov_1.788168_g48424_i0 PRJNA493632 51663 597 1.788168 10.67536296 Genomoviridae sp. 2202565 Viruses Viruses 872 0   NTclustered gi|2067465795|gb|MW678893.1| 2202565 g48424 i0 93.654 1.66834170854271 583 37 98 0 8 590 1 583 MAG: Genomoviridae sp. isolate D10_10246, complete genome blastn 996 872 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
11940097 11940097 PRJNA493632_P_NODE_305890_length_293_cov_3.113636_g302452_i0 PRJNA493632 305890 293 3.113636 9.12295348 Genomoviridae sp. 2202565 Viruses Viruses 470 6.33e-128   NTclustered gi|2067465795|gb|MW678893.1| 2202565 g302452 i0 95.563 17.6587030716724 293 13 100 0 1 293 1328 1036 MAG: Genomoviridae sp. isolate D10_10246, complete genome blastn 5174 470 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
15771559 15771559 PRJNA493632_P_NODE_728633_length_202_cov_5.209302_g725190_i0 PRJNA493632 728633 202 5.209302 10.52279004 Cressdnaviricota sp. 2748378 Viruses Viruses 267 5.77e-67   NTclustered gi|2384852566|gb|OM154726.1| 2748378 g725190 i0 90.547 0.995049504950495 201 19 99 0 2 202 167 367 MAG: Cressdnaviricota sp. isolate Miresoil virus 95, complete genome blastn 201 267 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
24693653 24693653 PRJNA493632_P_NODE_662200_length_241_cov_0.886905_g658759_i0 PRJNA493632 662200 241 0.886905 2.13744105 Camellia oleifera geminivirus 2713609 Viruses Viruses 250 7.17e-62   NTclustered gi|1815417282|gb|MN161582.1| 2713609 g658759 i0 86.404 1.2448132780083 228 31 95 0 8 235 1685 1458 Camellia oleifera geminivirus isolate Pxcs-11 segment DNA-B, complete sequence blastn 300 250 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Geminiviridae   Camellia oleifera geminivirus
26855358 26855358 PRJNA493632_P_NODE_508141_length_251_cov_0.865169_g504702_i0 PRJNA493632 508141 251 0.865169 2.17157419 Porcine circovirus 2 85708 Viruses Viruses 50.8 3.83e-5   NR AIT52334.1 85708 g504702 i0 42 1.9003984063745 69 23 82.5 1 208 2 108 159 AIT52334.1 truncated ORF2 [Porcine circovirus 2] diamond 477 50.8 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Circovirus porcine2
31150434 31150434 PRJNA493632_P_NODE_565035_length_247_cov_0.885057_g561596_i0 PRJNA493632 565035 247 0.885057 2.18609079 Cressdnaviricota sp. 2748378 Viruses Viruses 73.9 1.05e-13   NR AWW06122.1 2748378 g561596 i0 41.5 0.995951417004049 82 46 97.2 1 8 247 154 235 AWW06122.1 MAG: capsid protein [Cressdnaviricota sp.] diamond 246 73.9 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;