RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493632" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA493632 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29760538 29760538 PRJNA493632_P_NODE_319651_length_289_cov_3.703704_g316212_i0 PRJNA493632 319651 289 3.703704 10.70370456 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 66.2 3.47e-10   NR MBI4863740.1 2053586 g316212 i0 40.9 0.965397923875433 93 54 96.5 1 287 9 636 727 MBI4863740.1 VWA domain-containing protein [Candidatus Rifleibacteriota bacterium] diamond 279 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
31846457 31846457 PRJNA493632_P_NODE_263797_length_310_cov_3.021097_g260361_i0 PRJNA493632 263797 310 3.021097 9.3654007 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 108 4.7099999999999995e-25   NR MBI4862102.1 2053586 g260361 i0 50.8 1.21935483870968 126 37 97.7 1 2 304 335 460 MBI4862102.1 GAF domain-containing protein [Candidatus Rifleibacteriota bacterium] diamond 378 108 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32194763 32194763 PRJNA493632_P_NODE_555538_length_248_cov_0.880000_g552099_i0 PRJNA493632 555538 248 0.88 2.1824 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 63.5 3.37e-10   NR HNX76256.1 3022866 g552099 i0 40.7 0.979838709677419 81 48 98 0 6 248 86 166 HNX76256.1 ankyrin repeat domain-containing protein [Candidatus Rifleibacterium sp.] diamond 243 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;