RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493632" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9393786 9393786 PRJNA493632_P_NODE_544688_length_248_cov_29.725714_g541249_i0 PRJNA493632 544688 248 29.725714 73.71977072 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 152 7.169999999999998e-42   NR HSQ01306.1 2052315 g541249 i0 89 1.98387096774194 82 9 99.2 0 3 248 197 278 HSQ01306.1 sensor domain-containing diguanylate cyclase [Candidatus Dormiibacterota bacterium] diamond 492 152 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28308516 28308516 PRJNA493632_P_NODE_723486_length_207_cov_4.619403_g720044_i0 PRJNA493632 723486 207 4.619403 9.56216421 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 67.4 1.95e-11   NR HEY6114779.1 2052315 g720044 i0 55.2 0.971014492753623 67 25 89.9 1 192 7 158 224 HEY6114779.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 201 67.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31720238 31720238 PRJNA493632_P_NODE_728937_length_202_cov_4.255814_g725494_i0 PRJNA493632 728937 202 4.255814 8.59674428 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 89.7 3.1e-20   NR HSQ01331.1 2052315 g725494 i0 76.4 1.7970297029703 55 13 81.7 0 166 2 22 76 HSQ01331.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 363 89.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;