contig_metadata
35 rows where bioproject = "PRJNA493632" and tax_kingdom = "Pararnavirae"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 464190 | 464190 | PRJNA493632_P_NODE_45101_length_632_cov_2.239714_g41902_i0 | PRJNA493632 | 45101 | 632 | 2.239714 | 14.15499248 | Mus musculus mobilized endogenous polytropic provirus | 590745 | Viruses | Viruses | 1123 | 0 | NTclustered | gi|221326511|gb|FJ544576.1| | 590745 | g41902 | i0 | 98.734 | 151.030063291139 | 632 | 8 | 100 | 0 | 1 | 632 | 5327 | 4696 | Mus musculus mobilized endogenous polytropic provirus clone 5 truncated gag-pol polyprotein (gag) gene, complete cds | blastn | 95451 | 1123 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Mus musculus mobilized endogenous polytropic provirus | ||
| 1100314 | 1100314 | PRJNA493632_P_NODE_111501_length_435_cov_1.306630_g108091_i0 | PRJNA493632 | 111501 | 435 | 1.30663 | 5.6838405 | root | 1 | Root_unresolved | Root_unresolved | 795 | 0 | NTclustered | gi|57547617|tpd|BR000029.1| | 10654 | g108091 | i0 | 99.539 | 31.2896551724138 | 434 | 2 | 99 | 0 | 2 | 435 | 3223 | 2790 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A | blastn | 13611 | 802 | 0.991271820448878 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 1101380 | 1101380 | PRJNA493632_P_NODE_24881_length_815_cov_1.517520_g22146_i0 | PRJNA493632 | 24881 | 815 | 1.51752 | 12.367788 | root | 1 | Root_unresolved | Root_unresolved | 1467 | 0 | NTclustered | gi|57547617|tpd|BR000029.1| | 10654 | g22146 | i0 | 99.017 | 82.6687116564417 | 814 | 8 | 99 | 0 | 2 | 815 | 2108 | 1295 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A | blastn | 67375 | 1472 | 0.996603260869565 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 1735140 | 1735140 | PRJNA493632_P_NODE_242162_length_319_cov_0.914634_g238726_i0 | PRJNA493632 | 242162 | 319 | 0.914634 | 2.91768246 | Gammaretrovirus porConc | 3428960 | Viruses | Viruses | 311 | 4.47e-80 | NTclustered | gi|333034216|gb|HQ540594.1| | 194959 | g238726 | i0 | 95.855 | 0.605015673981191 | 193 | 6 | 60 | 2 | 1 | 191 | 9212 | 9404 | Porcine endogenous retrovirus B clone 742H1, complete genome | blastn | 193 | 311 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus porConc | ||
| 3655010 | 3655010 | PRJNA493632_P_NODE_65543_length_541_cov_1.188034_g62220_i0 | PRJNA493632 | 65543 | 541 | 1.188034 | 6.42726394 | root | 1 | Root_unresolved | Root_unresolved | 926 | 0 | NTclustered | gi|57547617|tpd|BR000029.1| | 10654 | g62220 | i0 | 98.292 | 105.770794824399 | 527 | 9 | 97 | 0 | 1 | 527 | 3304 | 3830 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A | blastn | 57222 | 929 | 0.996770721205597 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 7478528 | 7478528 | PRJNA493632_P_NODE_13126_length_1058_cov_3.480203_g11084_i0 | PRJNA493632 | 13126 | 1058 | 3.480203 | 36.82054774 | root | 1 | Root_unresolved | Root_unresolved | 1936 | 0 | NTclustered | gi|57547625|tpd|BR000031.1| | 10654 | g11084 | i0 | 99.622 | 87.3270321361059 | 1058 | 4 | 100 | 0 | 1 | 1058 | 2370 | 1313 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-C | blastn | 92392 | 1943 | 0.996397323726197 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 8118718 | 8118718 | PRJNA493632_P_NODE_535787_length_249_cov_1.005682_g532348_i0 | PRJNA493632 | 535787 | 249 | 1.005682 | 2.50414818 | Betaretrovirus maspfimon | 3427294 | Viruses | Viruses | 438 | 1.4799999999999996e-118 | NTclustered | gi|298352665|gb|HM143845.1| | 11942 | g532348 | i0 | 98.4 | 109.353413654618 | 250 | 3 | 100 | 1 | 1 | 249 | 3383 | 3134 | Simian retrovirus 1 isolate SRV_Vero_Assembled gag pseudogene, partial sequence; pol protein (pol) gene, partial cds; and env pseudogene, complete sequence | blastn | 27229 | 438 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Betaretrovirus | Betaretrovirus maspfimon | ||
| 12580013 | 12580013 | PRJNA493632_P_NODE_21190_length_870_cov_1.863237_g18645_i0 | PRJNA493632 | 21190 | 870 | 1.863237 | 16.2101619 | root | 1 | Root_unresolved | Root_unresolved | 1555 | 0 | NTclustered | gi|57547621|tpd|BR000030.1| | 10654 | g18645 | i0 | 98.851 | 107.873563218391 | 870 | 10 | 100 | 0 | 1 | 870 | 4178 | 3309 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-B | blastn | 93850 | 1563 | 0.99488163787588 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 13215311 | 13215311 | PRJNA493632_P_NODE_31651_length_735_cov_7.749245_g28702_i0 | PRJNA493632 | 31651 | 735 | 7.749245 | 56.95695075 | Gammaretrovirus felleu | 3428951 | Viruses | Viruses | 549 | 2.1399999999999992e-151 | NTclustered | gi|1249614576|dbj|AB898926.1| | 11768 | g28702 | i0 | 93.514 | 0.503401360544218 | 370 | 23 | 50 | 1 | 1 | 370 | 1429 | 1061 | Feline leukemia virus gene for gag-pol polyprotein gPr80, partial sequence, clone: g45-5R | blastn | 370 | 549 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus felleu | ||
| 13857948 | 13857948 | PRJNA493632_P_NODE_76511_length_507_cov_2.320276_g73145_i0 | PRJNA493632 | 76511 | 507 | 2.320276 | 11.76379932 | root | 1 | Root_unresolved | Root_unresolved | 931 | 0 | NTclustered | gi|57547625|tpd|BR000031.1| | 10654 | g73145 | i0 | 99.803 | 63.1439842209073 | 507 | 1 | 100 | 0 | 1 | 507 | 2877 | 2371 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-C | blastn | 32014 | 937 | 0.993596584845251 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 17044544 | 17044544 | PRJNA493632_P_NODE_629694_length_243_cov_0.905882_g626253_i0 | PRJNA493632 | 629694 | 243 | 0.905882 | 2.20129326 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|1321077542|gb|KY713237.1| | 11676 | g626253 | i0 | 100 | 0.119341563786008 | 29 | 0 | 12 | 0 | 45 | 73 | 780 | 752 | HIV-1 isolate SC012 from India nonfunctional gag protein (gag) gene, complete sequence | blastn | 29 | 54.7 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 17679487 | 17679487 | PRJNA493632_P_NODE_29954_length_753_cov_2.510294_g27054_i0 | PRJNA493632 | 29954 | 753 | 2.510294 | 18.90251382 | root | 1 | Root_unresolved | Root_unresolved | 1293 | 0 | NTclustered | gi|57547625|tpd|BR000031.1| | 10654 | g27054 | i0 | 98.753 | 143.26427622842 | 722 | 8 | 96 | 1 | 33 | 753 | 353 | 1074 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-C | blastn | 107878 | 1304 | 0.991564417177914 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 17682046 | 17682046 | PRJNA493632_P_NODE_7434_length_1326_cov_2.636073_g5935_i0 | PRJNA493632 | 7434 | 1326 | 2.636073 | 34.95432798 | root | 1 | Root_unresolved | Root_unresolved | 2422 | 0 | NTclustered | gi|57547625|tpd|BR000031.1| | 10654 | g5935 | i0 | 99.548 | 103.93137254902 | 1326 | 6 | 100 | 0 | 1 | 1326 | 7003 | 5678 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-C | blastn | 137813 | 2429 | 0.997118155619596 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 18953820 | 18953820 | PRJNA493632_P_NODE_36815_length_689_cov_10.803571_g33739_i0 | PRJNA493632 | 36815 | 689 | 10.803571 | 74.43660419 | Gammaretrovirus | 153135 | Viruses | Viruses | 1232 | 0 | NTclustered | gi|82582295|gb|DQ241301.1| | 356663 | g33739 | i0 | 98.983 | 105.377358490566 | 688 | 7 | 99 | 0 | 2 | 689 | 8161 | 7474 | Xenotropic MuLV-related virus VP35, complete genome | blastn | 72605 | 1232 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Murine leukemia-related retroviruses | ||
| 19589870 | 19589870 | PRJNA493632_P_NODE_44016_length_638_cov_7.824779_g40828_i0 | PRJNA493632 | 44016 | 638 | 7.824779 | 49.92209002 | Gammaretrovirus felleu | 3428951 | Viruses | Viruses | 449 | 1.9199999999999995e-121 | NTclustered | gi|1249614576|dbj|AB898926.1| | 11768 | g40828 | i0 | 96.337 | 0.427899686520376 | 273 | 10 | 43 | 0 | 366 | 638 | 1061 | 1333 | Feline leukemia virus gene for gag-pol polyprotein gPr80, partial sequence, clone: g45-5R | blastn | 273 | 449 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus felleu | ||
| 20227697 | 20227697 | PRJNA493632_P_NODE_23356_length_836_cov_1.427261_g20691_i0 | PRJNA493632 | 23356 | 836 | 1.427261 | 11.93190196 | root | 1 | Root_unresolved | Root_unresolved | 1513 | 0 | NTclustered | gi|57547617|tpd|BR000029.1| | 10654 | g20691 | i0 | 99.163 | 97.2356459330144 | 836 | 7 | 100 | 0 | 1 | 836 | 6084 | 6919 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A | blastn | 81289 | 1522 | 0.994086727989487 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 22781527 | 22781527 | PRJNA493632_P_NODE_90578_length_473_cov_2.535000_g87193_i0 | PRJNA493632 | 90578 | 473 | 2.535 | 11.99055 | root | 1 | Root_unresolved | Root_unresolved | 856 | 0 | NTclustered | gi|57547621|tpd|BR000030.1| | 10654 | g87193 | i0 | 99.154 | 119.659619450317 | 473 | 4 | 100 | 0 | 1 | 473 | 5724 | 5252 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-B | blastn | 56599 | 863 | 0.99188876013905 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 23417078 | 23417078 | PRJNA493632_P_NODE_483059_length_255_cov_2.269231_g479620_i0 | PRJNA493632 | 483059 | 255 | 2.269231 | 5.78653905 | Orthohepadnavirus hominoidei | 3431302 | Viruses | Viruses | 460 | 3.25e-125 | NTclustered | gi|116812272|dbj|AB246340.1| | 10407 | g479620 | i0 | 99.216 | 100 | 255 | 2 | 100 | 0 | 1 | 255 | 310 | 56 | Hepatitis B virus DNA, complete genome, clone: Ba_JPN58 | blastn | 25500 | 460 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Blubervirales | Hepadnaviridae | Orthohepadnavirus | Orthohepadnavirus hominoidei | ||
| 25326599 | 25326599 | PRJNA493632_P_NODE_112600_length_433_cov_1.894444_g109190_i0 | PRJNA493632 | 112600 | 433 | 1.894444 | 8.20294252 | root | 1 | Root_unresolved | Root_unresolved | 793 | 0 | NTclustered | gi|57547617|tpd|BR000029.1| | 10654 | g109190 | i0 | 99.538 | 121.685912240185 | 433 | 2 | 100 | 0 | 1 | 433 | 4970 | 5402 | TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A | blastn | 52690 | 795 | 0.99748427672956 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Tungrovirus | Tungrovirus oryzae | ||
| 26949882 | 26949882 | PRJNA493632_P_NODE_314182_length_291_cov_1.284404_g310743_i0 | PRJNA493632 | 314182 | 291 | 1.284404 | 3.73761564 | Mouse Intracisternal A-particle | 11932 | Viruses | Viruses | 60.1 | 5.14e-8 | NR | P31789.1 | 11932 | g310743 | i0 | 40.7 | 0.938144329896907 | 91 | 54 | 93.8 | 0 | 275 | 3 | 463 | 553 | P31789.1 RecName: Full=Envelope glycoprotein; AltName: Full=Env polyprotein; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor [Mouse Intracisternal A-particle] | diamond | 273 | 60.1 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Intracisternal A-particles | Mouse Intracisternal A-particle | ||
| 27139490 | 27139490 | PRJNA493632_P_NODE_607802_length_244_cov_1.456140_g604361_i0 | PRJNA493632 | 607802 | 244 | 1.45614 | 3.5529816 | Retroviridae sp. | 2681591 | Viruses | Viruses | 119 | 5.32e-29 | NR | UGO47158.1 | 2681591 | g604361 | i0 | 70.4 | 7.90573770491803 | 81 | 24 | 99.6 | 0 | 1 | 243 | 451 | 531 | UGO47158.1 MAG: envelope protein [Retroviridae sp.] | diamond | 1929 | 119 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Retroviridae sp. | |||
| 27361201 | 27361201 | PRJNA493632_P_NODE_221423_length_331_cov_1.344961_g217988_i0 | PRJNA493632 | 221423 | 331 | 1.344961 | 4.45182091 | Mouse Intracisternal A-particle | 11932 | Viruses | Viruses | 91.3 | 9.56e-19 | NR | P31789.1 | 11932 | g217988 | i0 | 57.3 | 0.806646525679758 | 89 | 38 | 80.7 | 0 | 291 | 25 | 393 | 481 | P31789.1 RecName: Full=Envelope glycoprotein; AltName: Full=Env polyprotein; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor [Mouse Intracisternal A-particle] | diamond | 267 | 91.3 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Intracisternal A-particles | Mouse Intracisternal A-particle | ||
| 28055638 | 28055638 | PRJNA493632_P_NODE_541485_length_249_cov_0.875000_g538046_i0 | PRJNA493632 | 541485 | 249 | 0.875 | 2.17875 | Lampyris noctiluca errantivirus 1 | 2552986 | Viruses | Viruses | 120 | 1.32e-29 | NR | QBP37036.1 | 2552986 | g538046 | i0 | 74.4 | 1.97590361445783 | 82 | 21 | 98.8 | 0 | 3 | 248 | 316 | 397 | QBP37036.1 putative RdRP [Lampyris noctiluca errantivirus 1] | diamond | 492 | 120 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Metaviridae | Errantivirus | Lampyris noctiluca errantivirus 1 | ||
| 28560985 | 28560985 | PRJNA493632_P_NODE_220227_length_332_cov_0.895753_g216792_i0 | PRJNA493632 | 220227 | 332 | 0.895753 | 2.97389996 | Gammaretrovirus murleu | 3428959 | Viruses | Viruses | 72 | 1.18e-12 | NR | 6HWW_A | 11786 | g216792 | i0 | 82 | 1.31927710843373 | 50 | 9 | 45.2 | 0 | 289 | 140 | 172 | 221 | 6HWW_A Chain A, Putative gag polyprotein [Murine leukemia virus] | diamond | 438 | 72 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 29350365 | 29350365 | PRJNA493632_P_NODE_541309_length_249_cov_0.875000_g537870_i0 | PRJNA493632 | 541309 | 249 | 0.875 | 2.17875 | Prosimian retrovirus 1 | 2821277 | Viruses | Viruses | 48.5 | 3.81e-4 | NR | QTI96652.1 | 2821277 | g537870 | i0 | 48.9 | 1.10843373493976 | 47 | 24 | 56.6 | 0 | 28 | 168 | 630 | 676 | QTI96652.1 pol [Prosimian retrovirus 1] | diamond | 276 | 48.5 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Betaretrovirus | Prosimian retrovirus 1 | ||
| 29539548 | 29539548 | PRJNA493632_P_NODE_319950_length_289_cov_3.009259_g316511_i0 | PRJNA493632 | 319950 | 289 | 3.009259 | 8.69675851 | Atlantic salmon swim bladder sarcoma virus | 348296 | Viruses | Viruses | 94.7 | 3.65e-20 | NR | YP_443922.1 | 348296 | g316511 | i0 | 60.3 | 1.45328719723183 | 73 | 29 | 75.8 | 0 | 288 | 70 | 929 | 1001 | YP_443922.1 polyprotein [Atlantic salmon swim bladder sarcoma virus] | diamond | 420 | 94.7 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Atlantic salmon swim bladder sarcoma virus | |||
| 29602505 | 29602505 | PRJNA493632_P_NODE_420010_length_268_cov_1.482051_g416571_i0 | PRJNA493632 | 420010 | 268 | 1.482051 | 3.97189668 | Baboon endogenous virus strain M7 | 11764 | Viruses | Viruses | 175 | 1.25e-48 | NR | YP_009109689.1 | 11764 | g416571 | i0 | 95.5 | 11.955223880597 | 89 | 4 | 99.6 | 0 | 1 | 267 | 1511 | 1599 | YP_009109689.1 gag-pol precursor polyprotein [Baboon endogenous virus strain M7] | diamond | 3204 | 176 | 0.994318181818182 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Baboon endogenous virus | ||
| 29760545 | 29760545 | PRJNA493632_P_NODE_332591_length_287_cov_0.836449_g329152_i0 | PRJNA493632 | 332591 | 287 | 0.836449 | 2.40060863 | Mouse Intracisternal A-particle | 11932 | Viruses | Viruses | 94.4 | 4.43e-20 | NR | P31789.1 | 11932 | g329152 | i0 | 63.6 | 0.804878048780488 | 77 | 28 | 80.5 | 0 | 4 | 234 | 476 | 552 | P31789.1 RecName: Full=Envelope glycoprotein; AltName: Full=Env polyprotein; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor [Mouse Intracisternal A-particle] | diamond | 231 | 94.4 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Intracisternal A-particles | Mouse Intracisternal A-particle | ||
| 29950244 | 29950244 | PRJNA493632_P_NODE_349371_length_283_cov_1.447619_g345932_i0 | PRJNA493632 | 349371 | 283 | 1.447619 | 4.09676177 | Mouse Intracisternal A-particle | 11932 | Viruses | Viruses | 66.2 | 1.54e-10 | NR | P31790.1 | 11932 | g345932 | i0 | 58.1 | 0.657243816254417 | 62 | 26 | 65.7 | 0 | 19 | 204 | 1 | 62 | P31790.1 RecName: Full=Intracisternal A-particle Gag-related polyprotein [Mouse Intracisternal A-particle] | diamond | 186 | 66.2 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Intracisternal A-particles | Mouse Intracisternal A-particle | ||
| 30613642 | 30613642 | PRJNA493632_P_NODE_564513_length_247_cov_1.258621_g561074_i0 | PRJNA493632 | 564513 | 247 | 1.258621 | 3.10879387 | Mus dunni endogenous virus | 75986 | Viruses | Viruses | 43.1 | 0.0289 | NR | AAC31803.1 | 75986 | g561074 | i0 | 51.9 | 0.631578947368421 | 52 | 25 | 63.2 | 0 | 44 | 199 | 64 | 115 | AAC31803.1 glycosylated gag protein [Mus dunni endogenous virus] | diamond | 156 | 43.1 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 30929752 | 30929752 | PRJNA493632_P_NODE_643834_length_242_cov_0.911243_g640393_i0 | PRJNA493632 | 643834 | 242 | 0.911243 | 2.20520806 | Golden hamster intracisternal A-particle H18 | 11752 | Viruses | Viruses | 95.1 | 1.36e-20 | NR | P04026.1 | 11752 | g640393 | i0 | 52.6 | 0.966942148760331 | 78 | 37 | 96.7 | 0 | 2 | 235 | 113 | 190 | P04026.1 RecName: Full=Intracisternal A-particle Pol-related polyprotein; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Golden hamster intracisternal A-particle H18] | diamond | 234 | 95.1 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Intracisternal A-particles | Golden hamster intracisternal A-particle H18 | ||
| 31056399 | 31056399 | PRJNA493632_P_NODE_435775_length_265_cov_0.802083_g432336_i0 | PRJNA493632 | 435775 | 265 | 0.802083 | 2.12551995 | Simian retrovirus 2 | 39068 | Viruses | Viruses | 44.7 | 0.0103 | NR | P51517.2 | 39068 | g432336 | i0 | 39.4 | 1.49433962264151 | 66 | 34 | 67.9 | 2 | 254 | 75 | 1536 | 1601 | P51517.2 RecName: Full=Gag-Pro-Pol polyprotein; Contains: RecName: Full=Matrix protein p10; Contains: RecName: Full=Phosphorylated protein pp24; Contains: RecName: Full=Phosphorylated protein pp18; Contains: RecName: Full=p12; Contains: RecName: Full=Capsid protein p27; Contains: RecName: Full=Nucleocapsid protein-dUTPase; Short=NC-dUTPase; Contains: RecName: Full=Protease 17 kDa; Contains: RecName: Full=Protease 13 kDa; Contains: RecName: Full=G-patch peptide; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Simian retrovirus 2] | diamond | 396 | 44.7 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Betaretrovirus | Betaretrovirus maspfimon | ||
| 31941279 | 31941279 | PRJNA493632_P_NODE_114817_length_430_cov_0.843137_g111406_i0 | PRJNA493632 | 114817 | 430 | 0.843137 | 3.6254891 | Chinese hamster Intracisternal A-particle CHIAP34 | 11751 | Viruses | Viruses | 80.9 | 1.35e-14 | NR | pir|D40899| | 11751 | g111406 | i0 | 51.6 | 0.872093023255814 | 64 | 31 | 44.7 | 0 | 237 | 428 | 107 | 170 | pir|D40899| pol polyprotein - Chinese hamster intracisternal A-particle CHIAP34 [Chinese hamster Intracisternal A-particle CHIAP34] | diamond | 375 | 80.9 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Intracisternal A-particles | Chinese hamster Intracisternal A-particle CHIAP34 | ||
| 32353202 | 32353202 | PRJNA493632_P_NODE_557799_length_248_cov_0.880000_g554360_i0 | PRJNA493632 | 557799 | 248 | 0.88 | 2.1824 | Halyomorpha halys erranti-like virus 1 | 2950329 | Viruses | Viruses | 83.6 | 1.7e-16 | NR | URQ09129.1 | 2950329 | g554360 | i0 | 56.5 | 0.834677419354839 | 69 | 30 | 83.5 | 0 | 2 | 208 | 663 | 731 | URQ09129.1 replicase [Halyomorpha halys erranti-like virus 1] | diamond | 207 | 83.6 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Metaviridae | Halyomorpha halys erranti-like virus 1 | |||
| 32763233 | 32763233 | PRJNA493632_P_NODE_46420_length_625_cov_0.920290_g43213_i0 | PRJNA493632 | 46420 | 625 | 0.92029 | 5.7518125 | Lampyris noctiluca errantivirus 1 | 2552986 | Viruses | Viruses | 200 | 2.1099999999999993e-55 | NR | QBP37036.1 | 2552986 | g43213 | i0 | 70.6 | 0.6864 | 143 | 42 | 68.6 | 0 | 430 | 2 | 264 | 406 | QBP37036.1 putative RdRP [Lampyris noctiluca errantivirus 1] | diamond | 429 | 200 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Metaviridae | Errantivirus | Lampyris noctiluca errantivirus 1 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;