RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA493632", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA493632 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4292154 4292154 PRJNA493632_P_NODE_51004_length_600_cov_3.075901_g47765_i0 PRJNA493632 51004 600 3.075901 18.455406 Linderina pennispora 61395 Fungi Fungi 54.7 0.017   NTclustered gi|2028325242|ref|XM_040888387.1| 61395 g47765 i0 100 0.0483333333333333 29 0 5 0 449 477 2170 2142 Linderina pennispora prokaryotic type I DNA topoisomerase (DL89DRAFT_269697), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
7480952 7480952 PRJNA493632_P_NODE_47366_length_619_cov_2.884615_g44150_i0 PRJNA493632 47366 619 2.884615 17.85576685 Eukaryota 2759 Fungi Fungi 448 6.7e-121   NTclustered gi|2028311994|ref|XM_040883102.1| 61395 g44150 i0 83.436 92.3344103392569 489 74 79 7 63 549 1178 695 Linderina pennispora uncharacterized protein (DL89DRAFT_11075), mRNA blastn 57155 448 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
20227913 20227913 PRJNA493632_P_NODE_259216_length_310_cov_5.654008_g255780_i0 PRJNA493632 259216 310 5.654008 17.5274248 Eukaryota 2759 Fungi Fungi 65.8 3.72e-6   NTclustered gi|2572089157|gb|OR502659.1| 34485 g255780 i0 100 10.8322580645161 35 0 11 0 161 195 701 667 Entomophthora muscae strain KVL 14-117 large subunit ribosomal RNA gene, partial sequence blastn 3358 65.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae
22140754 22140754 PRJNA493632_P_NODE_458018_length_260_cov_2.128342_g454579_i0 PRJNA493632 458018 260 2.128342 5.5336892 Entomophthora muscae 34485 Fungi Fungi 298 2.7599999999999998e-76   NTclustered gi|82398173|gb|DQ273772.1| 34485 g454579 i0 87.5 48.65 264 26 100 6 1 260 2047 1787 Entomophthora muscae isolate AFTOL-ID 28 28S ribosomal RNA gene, partial sequence blastn 12649 298 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae
26601598 26601598 PRJNA493632_P_NODE_665921_length_239_cov_5.614458_g662480_i0 PRJNA493632 665921 239 5.614458 13.41855462 Coemansia sp. RSA 552 2663883 Fungi Fungi 42.7 0.0345   NR KAJ2160556.1 2663883 g662480 i0 32.4 0.853556485355649 68 32 70.3 3 187 20 347 412 KAJ2160556.1 oligosaccharyl transferase glycoprotein complex, beta subunit [Coemansia sp. RSA 552] diamond 204 42.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia sp. RSA 552
30487492 30487492 PRJNA493632_P_NODE_666513_length_239_cov_3.493976_g663072_i0 PRJNA493632 666513 239 3.493976 8.35060264 Linderina pennispora 61395 Fungi Fungi 41.2 0.0461   NR KAJ1936263.1 61395 g663072 i0 37.5 0.602510460251046 48 25 60.3 1 27 170 22 64 KAJ1936263.1 hypothetical protein EC988_008247, partial [Linderina pennispora] diamond 144 41.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;