RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493632", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA493632 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6840090 6840090 PRJNA493632_P_NODE_361346_length_280_cov_2.468599_g357907_i0 PRJNA493632 361346 280 2.468599 6.9120772 Fungi 4751 Fungi Fungi 144 1.4099999999999999e-42   NR ORZ31460.1 765915 g357907 i0 83.3 10.0285714285714 84 14 90 0 28 279 1 84 ORZ31460.1 putative RPL43B-60S large subunit ribosomal protein [Catenaria anguillulae PL171] diamond 2808 144 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
27108100 27108100 PRJNA493632_P_NODE_663702_length_240_cov_3.455090_g660261_i0 PRJNA493632 663702 240 3.45509 8.292216 Blastocladiella britannica 64508 Fungi Fungi 45.4 0.00391   NR KAI9217733.1 64508 g660261 i0 38.6 1.0375 83 46 97.5 2 2 235 386 468 KAI9217733.1 hypothetical protein BC828DRAFT_408237 [Blastocladiella britannica] diamond 249 45.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
30408708 30408708 PRJNA493632_P_NODE_466093_length_258_cov_6.021622_g462654_i0 PRJNA493632 466093 258 6.021622 15.53578476 Fungi 4751 Fungi Fungi 96.7 1.7799999999999995e-23   NR KAJ3357733.1 64505 g462654 i0 60.8 1.72093023255814 74 29 86 0 35 256 1 74 KAJ3357733.1 60S ribosomal protein L34 [Allomyces javanicus] diamond 444 97.1 0.995880535530381 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces javanicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;