contig_metadata
5 rows where bioproject = "PRJNA493632", tax_clade = "Sar" and tax_phylum = "Foraminifera"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10668042 | 10668042 | PRJNA493632_P_NODE_461289_length_259_cov_4.483871_g457850_i0 | PRJNA493632 | 461289 | 259 | 4.483871 | 11.61322589 | Trochammina hadai | 46140 | SAR_Eukaryotes | SAR_Eukaryotes | 405 | 1.57e-108 | NTclustered | gi|1433211025|gb|MF771007.1| | 46140 | g457850 | i0 | 95.019 | 91.0579150579151 | 261 | 8 | 99 | 5 | 1 | 258 | 173 | 431 | Trochammina hadai isolate 96 clone 3 18S ribosomal RNA gene, partial sequence | blastn | 23584 | 405 | 1 | Eukaryota | Sar | Foraminifera | Textulariida | Trochamminidae | Trochammina | Trochammina hadai | |||
| 31056322 | 31056322 | PRJNA493632_P_NODE_240715_length_319_cov_3.443089_g237279_i0 | PRJNA493632 | 240715 | 319 | 3.443089 | 10.98345391 | Reticulomyxa filosa | 46433 | SAR_Eukaryotes | SAR_Eukaryotes | 67 | 2.75e-10 | NR | ETO22264.1 | 46433 | g237279 | i0 | 62.8 | 0.404388714733542 | 43 | 16 | 40.4 | 0 | 190 | 318 | 288 | 330 | ETO22264.1 hypothetical protein RFI_14933 [Reticulomyxa filosa] | diamond | 129 | 67 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa | ||||
| 31103350 | 31103350 | PRJNA493632_P_NODE_325135_length_288_cov_2.279070_g321696_i0 | PRJNA493632 | 325135 | 288 | 2.27907 | 6.5637216 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 97.8 | 4.8799999999999997e-23 | NR | ETO34651.1 | 46433 | g321696 | i0 | 66.2 | 2.125 | 68 | 23 | 70.8 | 0 | 286 | 83 | 128 | 195 | ETO34651.1 beta-hexosaminidase [Reticulomyxa filosa] | diamond | 612 | 97.8 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa | ||||
| 32147279 | 32147279 | PRJNA493632_P_NODE_206478_length_340_cov_3.419476_g203043_i0 | PRJNA493632 | 206478 | 340 | 3.419476 | 11.6262184 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 66.6 | 4.87e-10 | NR | ETO16722.1 | 46433 | g203043 | i0 | 51.9 | 3.16764705882353 | 52 | 25 | 45.9 | 0 | 7 | 162 | 429 | 480 | ETO16722.1 coatomer protein complex [Reticulomyxa filosa] | diamond | 1077 | 67 | 0.994029850746269 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa | ||||
| 32794597 | 32794597 | PRJNA493632_P_NODE_655340_length_241_cov_0.916667_g651899_i0 | PRJNA493632 | 655340 | 241 | 0.916667 | 2.20916747 | Reticulomyxa filosa | 46433 | SAR_Eukaryotes | SAR_Eukaryotes | 43.5 | 0.0179 | NR | ETO00579.1 | 46433 | g651899 | i0 | 37.5 | 0.597510373443983 | 48 | 25 | 53.5 | 1 | 93 | 221 | 39 | 86 | ETO00579.1 hypothetical protein RFI_36862, partial [Reticulomyxa filosa] | diamond | 144 | 43.5 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;