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contig_metadata

7 rows where bioproject = "PRJNA493632", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 7 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 7 ✖

bioproject 1

  • PRJNA493632 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27677045 27677045 PRJNA493632_P_NODE_258084_length_310_cov_9.510549_g254648_i0 PRJNA493632 258084 310 9.510549 29.4827019 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 53.5 1.29e-5   NR MBP7829185.1 2212473 g254648 i0 54.2 1.38387096774194 48 22 46.5 0 161 304 416 463 MBP7829185.1 L-seryl-tRNA(Sec) selenium transferase [Kiritimatiellia bacterium] diamond 429 53.5 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29034695 29034695 PRJNA493632_P_NODE_264088_length_310_cov_2.974684_g260652_i0 PRJNA493632 264088 310 2.974684 9.2215204 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 146 2.85e-38   NR HNX33894.1 2212473 g260652 i0 58.5 1.14193548387097 118 33 98.7 1 5 310 144 261 HNX33894.1 DUF6259 domain-containing protein [Kiritimatiellia bacterium] diamond 354 146 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30898313 30898313 PRJNA493632_P_NODE_711394_length_219_cov_4.157534_g707952_i0 PRJNA493632 711394 219 4.157534 9.10499946 Pontiella sp. 2837462 Bacteria Bacteria 105 2.9299999999999998e-24   NR WP_372807674.1 2837462 g707952 i0 71.8 1.95890410958904 71 20 97.3 0 217 5 424 494 WP_372807674.1 potassium/proton antiporter, partial [Pontiella sp.] diamond 429 105 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Pontiellaceae Pontiella Pontiella sp.
30961481 30961481 PRJNA493632_P_NODE_704454_length_226_cov_2.156863_g701013_i0 PRJNA493632 704454 226 2.156863 4.87451038 Kiritimatiellaceae bacterium 2026752 Bacteria Bacteria 43.1 0.0216   NR MAS98139.1 2026752 g701013 i0 32.8 0.809734513274336 61 41 81 0 4 186 44 104 MAS98139.1 hypothetical protein [Kiritimatiellaceae bacterium] diamond 183 43.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae   Kiritimatiellaceae bacterium
31656722 31656722 PRJNA493632_P_NODE_610777_length_244_cov_0.900585_g607336_i0 PRJNA493632 610777 244 0.900585 2.1974274 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 83.6 1.62e-16   NR MBN1269769.1 2212473 g607336 i0 48.1 2.90163934426229 81 42 99.6 0 243 1 36 116 MBN1269769.1 inverse autotransporter beta domain-containing protein [Kiritimatiellia bacterium] diamond 708 83.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31814935 31814935 PRJNA493632_P_NODE_312557_length_291_cov_2.422018_g309118_i0 PRJNA493632 312557 291 2.422018 7.04807238 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 112 6.050000000000001e-27   NR HQL50801.1 2212473 g309118 i0 83.6 0.690721649484536 67 11 69.1 0 289 89 327 393 HQL50801.1 Fic family protein [Kiritimatiellia bacterium] diamond 201 112 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32416260 32416260 PRJNA493632_P_NODE_385299_length_275_cov_2.019802_g381860_i0 PRJNA493632 385299 275 2.019802 5.5544555 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 182 1.72e-52   NR MDD2462102.1 2212473 g381860 i0 100 0.992727272727273 91 0 99.3 0 2 274 464 554 MDD2462102.1 putative Ig domain-containing protein [Kiritimatiellia bacterium] diamond 273 182 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;