RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493632", tax_clade = "FCB group" and tax_phylum = "Candidatus Zixiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA493632 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28355629 28355629 PRJNA493632_P_NODE_333606_length_286_cov_2.690141_g330167_i0 PRJNA493632 333606 286 2.690141 7.69380326 Bacteria 2 Bacteria Bacteria 144 6.6299999999999996e-40   NR KPK99298.1 1703427 g330167 i0 79.8 16.6678321678322 94 19 98.6 0 286 5 168 261 KPK99298.1 MAG: hypothetical protein AMJ91_08295, partial [candidate division Zixibacteria bacterium SM23_73_3] diamond 4767 144 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         candidate division Zixibacteria bacterium SM23_73_3
29287099 29287099 PRJNA493632_P_NODE_680189_length_234_cov_4.602484_g676748_i0 PRJNA493632 680189 234 4.602484 10.76981256 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 42.7 0.031   NR MBN2226194.1 2053527 g676748 i0 33.3 0.692307692307692 54 36 69.2 0 192 31 96 149 MBN2226194.1 4Fe-4S dicluster domain-containing protein [Candidatus Zixiibacteriota bacterium] diamond 162 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
32574694 32574694 PRJNA493632_P_NODE_644459_length_242_cov_0.911243_g641018_i0 PRJNA493632 644459 242 0.911243 2.20520806 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 43.1 0.00673   NR HEX9912114.1 2053527 g641018 i0 50 0.471074380165289 38 19 47.1 0 14 127 2 39 HEX9912114.1 tetratricopeptide repeat protein [Candidatus Zixiibacteriota bacterium] diamond 114 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;