RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA493632", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 7 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA493632 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10671416 10671416 PRJNA493632_P_NODE_657809_length_241_cov_0.916667_g654368_i0 PRJNA493632 657809 241 0.916667 2.20916747 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 135 2.21e-35   NR MBW7874921.1 2030808 g654368 i0 82.5 0.995850622406639 80 14 99.6 0 241 2 228 307 MBW7874921.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Candidatus Cloacimonadota bacterium] diamond 240 135 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
15768178 15768178 PRJNA493632_P_NODE_529413_length_250_cov_0.870056_g525974_i0 PRJNA493632 529413 250 0.870056 2.17514 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 52.8 0.023   NTclustered gi|2621786041|emb|OY782499.1| 3060593 g525974 i0 100 0.112 28 0 11 0 88 115 1165433 1165460 MAG: Candidatus Cloacimonadales bacterium isolate 75f626e2-485c-4b2b-9e06-a5cee39fa54d genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium
27582121 27582121 PRJNA493632_P_NODE_630824_length_243_cov_0.905882_g627383_i0 PRJNA493632 630824 243 0.905882 2.20129326 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 144 7.39e-38   NR MBW7876822.1 2030808 g627383 i0 93.8 1 81 5 100 0 243 1 349 429 MBW7876822.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPB [Candidatus Cloacimonadota bacterium] diamond 243 144 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27708797 27708797 PRJNA493632_P_NODE_262384_length_310_cov_3.362869_g258948_i0 PRJNA493632 262384 310 3.362869 10.4248939 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 65.1 1.17e-9   NR MBW7877447.1 2030808 g258948 i0 60 1.00645161290323 45 18 43.5 0 163 297 368 412 MBW7877447.1 radical SAM protein [Candidatus Cloacimonadota bacterium] diamond 312 65.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30424674 30424674 PRJNA493632_P_NODE_642633_length_242_cov_0.911243_g639192_i0 PRJNA493632 642633 242 0.911243 2.20520806 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 147 1.08e-39   NR MEF3694505.1 2030808 g639192 i0 92.5 0.991735537190083 80 6 99.2 0 241 2 52 131 MEF3694505.1 choice-of-anchor J domain-containing protein [Candidatus Cloacimonadota bacterium] diamond 240 147 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30866456 30866456 PRJNA493632_P_NODE_536334_length_249_cov_0.875000_g532895_i0 PRJNA493632 536334 249 0.875 2.17875 Candidatus Cloacimonas sp. 4484_2 2053534 Bacteria Bacteria 43.1 0.028   NR OQX52152.1 1968525 g532895 i0 36.8 0.686746987951807 57 36 68.7 0 213 43 2 58 OQX52152.1 MAG: hypothetical protein B5M53_09250 [Candidatus Cloacimonas sp. 4484_209] diamond 171 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp. 4484_209
32511512 32511512 PRJNA493632_P_NODE_713419_length_217_cov_4.090278_g709977_i0 PRJNA493632 713419 217 4.090278 8.87590326 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 45.8 0.00179   NR MCK9433901.1 2030808 g709977 i0 35.1 0.788018433179724 57 37 78.8 0 1 171 102 158 MCK9433901.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 171 45.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;