RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493632" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJNA493632 · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8118668 8118668 PRJNA493632_P_NODE_533027_length_249_cov_1.789773_g529588_i0 PRJNA493632 533027 249 1.789773 4.45653477 Thecamonas trahens 529818 Root_unresolved Root_unresolved 150 7.77e-32   NTclustered gi|923128616|ref|XM_013902321.1| 461836 g529588 i0 89.167 0.967871485943775 120 13 48 0 66 185 5712 5593 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_11901), partial mRNA blastn 241 150 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14491727 14491727 PRJNA493632_P_NODE_391952_length_274_cov_1.189055_g388513_i0 PRJNA493632 391952 274 1.189055 3.2580107 Thecamonas trahens 529818 Root_unresolved Root_unresolved 60.2 1.5e-4   NTclustered gi|923128568|ref|XM_013902297.1| 461836 g388513 i0 88 3.44525547445255 50 6 18 0 52 101 931 882 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_05701), partial mRNA blastn 944 60.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29350351 29350351 PRJNA493632_P_NODE_498069_length_252_cov_2.379888_g494630_i0 PRJNA493632 498069 252 2.379888 5.99731776 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 115 1.02e-27   NR XP_013761695.1 461836 g494630 i0 61.4 0.988095238095238 83 32 98.8 0 3 251 354 436 XP_013761695.1 UDP-galactopyranose mutase [Thecamonas trahens ATCC 50062] diamond 249 115 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;