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contig_metadata

15 rows where bioproject = "PRJNA493244", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 15 ✖

tax_phylum 1

  • Nitrososphaerota · 15 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493244 · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3008654 3008654 PRJNA493244_P_NODE_936043_length_436_cov_2.549333_g913030_i0 PRJNA493244 936043 436 2.549333 11.11509188 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 758 0   NTclustered gi|808354332|gb|CP011097.2| 1603555 g913030 i0 98.598 64.3738532110092 428 6 98 0 9 436 738613 739040 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 28067 758 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
8108111 8108111 PRJNA493244_P_NODE_1131967_length_353_cov_2.489726_g1108845_i0 PRJNA493244 1131967 353 2.489726 8.78873278 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 531 3.5199999999999993e-146   NTclustered gi|808354332|gb|CP011097.2| 1603555 g1108845 i0 95.482 0.940509915014164 332 15 94 0 22 353 822864 822533 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 332 531 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
11935335 11935335 PRJNA493244_P_NODE_250710_length_1069_cov_3.957341_g237006_i0 PRJNA493244 250710 1069 3.957341 42.30397529 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 1655 0   NTclustered gi|808354332|gb|CP011097.2| 1603555 g237006 i0 95.057 1.89710009354537 1052 52 98 0 1 1052 971644 972695 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 2028 1655 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
22131912 22131912 PRJNA493244_P_NODE_1344518_length_284_cov_1.147982_g1321394_i0 PRJNA493244 1344518 284 1.147982 3.26026888 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 453 6.15e-123   NTclustered gi|808354332|gb|CP011097.2| 1603555 g1321394 i0 95.423 2 284 13 100 0 1 284 797020 796737 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 568 453 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
28024101 28024101 PRJNA493244_P_NODE_1362005_length_279_cov_1.270642_g1338880_i0 PRJNA493244 1362005 279 1.270642 3.54509118 Nitrososphaera sp. 1971748 Archaea Archaea 54.3 3e-6   NR HEY1249070.1 1971748 g1338880 i0 43.2 0.795698924731183 74 36 78.5 3 18 236 3 71 HEY1249070.1 exonuclease domain-containing protein [Nitrososphaera sp.] diamond 222 54.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
28813054 28813054 PRJNA493244_P_NODE_603288_length_638_cov_4.558059_g581723_i0 PRJNA493244 603288 638 4.558059 29.08041642 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 331 1.1399999999999998e-109   NR WP_048188683.1 1603555 g581723 i0 79 0.963949843260188 205 43 96.4 0 615 1 20 224 WP_048188683.1 NRAMP family divalent metal transporter [Candidatus Nitrosotenuis cloacae] diamond 615 331 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
29981703 29981703 PRJNA493244_P_NODE_1708951_length_203_cov_0.901408_g1685826_i0 PRJNA493244 1708951 203 0.901408 1.82985824 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 97.8 5.31e-22   NR HET6640955.1 2169593 g1685826 i0 84.6 0.960591133004926 65 10 96.1 0 196 2 354 418 HET6640955.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 195 97.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30803112 30803112 PRJNA493244_P_NODE_1562674_length_228_cov_9.239521_g1539549_i0 PRJNA493244 1562674 228 9.239521 21.06610788 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 132 1.11e-34   NR MPZ06476.1 2169593 g1539549 i0 94.1 1.78947368421053 68 4 89.5 0 25 228 296 363 MPZ06476.1 ribonucleotide-diphosphate reductase subunit beta [Nitrososphaeraceae archaeon] diamond 408 132 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31056232 31056232 PRJNA493244_P_NODE_1216315_length_323_cov_2.732824_g1193191_i0 PRJNA493244 1216315 323 2.732824 8.82702152 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 197 5.57e-62   NR HEY7694819.1 2169593 g1193191 i0 98.1 0.956656346749226 103 2 95.7 0 310 2 80 182 HEY7694819.1 ABC transporter permease [Nitrososphaeraceae archaeon] diamond 309 197 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31593662 31593662 PRJNA493244_P_NODE_1694876_length_204_cov_1.790210_g1671751_i0 PRJNA493244 1694876 204 1.79021 3.6520284 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 45.1 0.00229   NR HEY7082903.1 2169593 g1671751 i0 51.2 0.632352941176471 43 21 63.2 0 151 23 7 49 HEY7082903.1 CBS domain-containing protein [Nitrososphaeraceae archaeon] diamond 129 45.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31957296 31957296 PRJNA493244_P_NODE_1703117_length_203_cov_1.802817_g1679992_i0 PRJNA493244 1703117 203 1.802817 3.65971851 root 1 Root_unresolved Root_unresolved 42.4 0.0227   NR HEY1249085.1 1971748 g1679992 i0 31.6 1.72906403940887 57 37 84.2 1 8 178 90 144 HEY1249085.1 hypothetical protein [Nitrososphaera sp.] diamond 351 42.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32353021 32353021 PRJNA493244_P_NODE_1418319_length_263_cov_2.504950_g1395194_i0 PRJNA493244 1418319 263 2.50495 6.5880185000000004 Nitrosopumilus sp. 2024843 Archaea Archaea 168 2.3399999999999998e-46   NR MBA3285665.1 2024843 g1395194 i0 95.2 0.958174904942966 84 4 95.8 0 253 2 124 207 MBA3285665.1 HD domain-containing protein [Nitrosopumilus sp.] diamond 252 168 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
32447919 32447919 PRJNA493244_P_NODE_792479_length_511_cov_2.957778_g769824_i0 PRJNA493244 792479 511 2.957778 15.11424558 Nitrososphaerota archaeon 2026795 Archaea Archaea 103 1.26e-23   NR MDE1867680.1 2026795 g769824 i0 39.2 1.00391389432485 171 87 93.9 5 11 490 39 203 MDE1867680.1 hypothetical protein [Nitrososphaerota archaeon] diamond 513 103 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32511244 32511244 PRJNA493244_P_NODE_1009319_length_403_cov_1.470760_g986224_i0 PRJNA493244 1009319 403 1.47076 5.9271628 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 99.8 1.87e-22   NR HLN33694.1 2169593 g986224 i0 100 0.364764267990074 49 0 36.5 0 12 158 229 277 HLN33694.1 DNA/RNA non-specific endonuclease [Nitrososphaeraceae archaeon] diamond 147 99.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32873394 32873394 PRJNA493244_P_NODE_655940_length_599_cov_2.349442_g633944_i0 PRJNA493244 655940 599 2.349442 14.07315758 root 1 Root_unresolved Root_unresolved 147 5.3e-42   NR HET6517439.1 2202732 g633944 i0 66.3 4.05175292153589 101 34 50.6 0 414 112 1 101 HET6517439.1 urease subunit beta [Nitrosopumilaceae archaeon] diamond 2427 147 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;