RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493244" and tax_phylum = "Lentisphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493244 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13209829 13209829 PRJNA493244_P_NODE_1604371_length_219_cov_2.911392_g1581246_i0 PRJNA493244 1604371 219 2.911392 6.37594848 Lentisphaerales bacterium 2448604 Bacteria Bacteria 98.6 5.91e-22   NR MCH2204499.1 2448604 g1581246 i0 71.2 2.71232876712329 66 19 90.4 0 217 20 241 306 MCH2204499.1 S8 family serine peptidase [Lentisphaerales bacterium] diamond 594 98.6 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales     Lentisphaerales bacterium
20857659 20857659 PRJNA493244_P_NODE_1572257_length_226_cov_2.654545_g1549132_i0 PRJNA493244 1572257 226 2.654545 5.9992717 Victivallales bacterium CCUG 44730 2094242 Bacteria Bacteria 276 1.1e-69   NTclustered gi|1359122976|gb|CP027227.1| 2094242 g1549132 i0 91.176 132.867256637168 204 16 90 2 1 203 2341690 2341892 Victivallales bacterium CCUG 44730 chromosome, complete genome blastn 30028 276 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium CCUG 44730
30866266 30866266 PRJNA493244_P_NODE_1362754_length_278_cov_38.032258_g1339629_i0 PRJNA493244 1362754 278 38.032258 105.72967724 Lentisphaeria bacterium 2053569 Bacteria Bacteria 57.8 2.02e-7   NR MCH2176847.1 2053569 g1339629 i0 50.9 0.571942446043165 53 25 57.2 1 261 103 204 255 MCH2176847.1 glutaminyl-peptide cyclotransferase [Lentisphaeria bacterium] diamond 159 57.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;