RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA493244", tax_phylum = "Hofneiviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Hofneiviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493244 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13853571 13853571 PRJNA493244_P_NODE_1693151_length_204_cov_4.426573_g1670026_i0 PRJNA493244 1693151 204 4.426573 9.03020892 root 1 Root_unresolved Root_unresolved 163 7.88e-36   NTclustered gi|2500352645|ref|NC_075032.1| 10863 g1670026 i0 98.901 64.4705882352941 91 1 68 0 104 194 3043 2953 Enterobacteria phage f1 isolate f1_2_FR, complete genome blastn 13152 163 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Inovirus Inovirus M13
17034971 17034971 PRJNA493244_P_NODE_870654_length_468_cov_12.022113_g847750_i0 PRJNA493244 870654 468 12.022113 56.26348884 Inoviridae sp. 2219103 Viruses Viruses 723 0   NTclustered gi|2054538460|tpg|BK047807.1| 2219103 g847750 i0 95.565 5.8034188034188 451 20 96 0 9 459 2374 2824 MAG TPA_asm: Inoviridae sp. isolate ctlii5, partial genome blastn 2716 723 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
32384372 32384372 PRJNA493244_P_NODE_1261779_length_308_cov_8.777328_g1238655_i0 PRJNA493244 1261779 308 8.777328 27.03417024 Inoviridae sp. 2219103 Viruses Viruses 57.4 5.49e-7   NR XOE96144.1 2219103 g1238655 i0 64.7 0.331168831168831 34 12 33.1 0 306 205 80 113 XOE96144.1 MAG: hypothetical protein [Inoviridae sp.] diamond 102 57.4 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
32636919 32636919 PRJNA493244_P_NODE_468540_length_760_cov_4.251788_g448973_i0 PRJNA493244 468540 760 4.251788 32.3135888 Tubulavirales sp. 2833306 Viruses Viruses 125 1.9299999999999998e-32   NR XOF02939.1 2833306 g448973 i0 88.1 0.26447368421052603 67 8 26.4 0 559 759 1 67 XOF02939.1 MAG: hypothetical protein [Tubulavirales sp.] diamond 201 125 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales     Tubulavirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;