RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA493244" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1732056 1732056 PRJNA493244_P_NODE_626242_length_620_cov_16.633274_g604465_i0 PRJNA493244 626242 620 16.633274 103.1262988 Genomoviridae sp. 2202565 Viruses Viruses 1085 0   NTclustered gi|2756421351|gb|PP744662.1| 2202565 g604465 i0 99.169 58.0258064516129 602 5 97 0 1 602 658 1259 MAG: Genomoviridae sp. isolate 226_270563 genomic sequence blastn 35976 1085 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
19581094 19581094 PRJNA493244_P_NODE_1245976_length_313_cov_13.706349_g1222852_i0 PRJNA493244 1245976 313 13.706349 42.90087237 Genomoviridae sp. 2202565 Viruses Viruses 475 1.4699999999999995e-129   NTclustered gi|2756421351|gb|PP744662.1| 2202565 g1222852 i0 98.513 37.2939297124601 269 4 86 0 23 291 1782 2050 MAG: Genomoviridae sp. isolate 226_270563 genomic sequence blastn 11673 475 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;