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contig_metadata

30 rows where bioproject = "PRJNA493244" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493244 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6834127 6834127 PRJNA493244_P_NODE_1734546_length_195_cov_6.328358_g1711421_i0 PRJNA493244 1734546 195 6.328358 12.3402981 Orpinomyces sp. OUS1 301046 Fungi Fungi 163 7.46e-36   NTclustered gi|55859492|emb|AJ864475.1| 301046 g1711421 i0 83.06 93.0358974358974 183 27 92 4 1 180 4543 4724 Orpinomyces sp. OUS1 partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA, clone V5-1 blastn 18142 163 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Orpinomyces Orpinomyces sp. OUS1
9384861 9384861 PRJNA493244_P_NODE_377008_length_866_cov_8.067081_g359362_i0 PRJNA493244 377008 866 8.067081 69.86092146 Polychytrium aggregatum 110093 Fungi Fungi 370 2.12e-97   NTclustered gi|2432152064|ref|XM_053105682.1| 110093 g359362 i0 80.753 51.9376443418014 478 88 55 4 327 802 590 115 Polychytrium aggregatum ribosomal protein L10e/L16 (BJ171DRAFT_137240), mRNA blastn 44978 370 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
10658862 10658862 PRJNA493244_P_NODE_1201349_length_328_cov_3.355805_g1178225_i0 PRJNA493244 1201349 328 3.355805 11.0070404 Arkaya lepida 1134058 Fungi Fungi 95.3 5.05e-15   NTclustered gi|82398550|gb|DQ273814.1| 1134058 g1178225 i0 86.517 29.0121951219512 89 8 27 3 1 89 4540 4624 Karlingiomyces sp. JEL93 isolate AFTOL-ID 629 28S ribosomal RNA gene, partial sequence blastn 9516 95.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Arkaya Arkaya lepida
11933997 11933997 PRJNA493244_P_NODE_1335430_length_286_cov_2.715556_g1312306_i0 PRJNA493244 1335430 286 2.715556 7.76649016 Synchytrium decipiens 324676 Fungi Fungi 303 6.61e-78   NTclustered gi|82398555|gb|DQ273819.1| 324676 g1312306 i0 87.778 60.5734265734266 270 19 92 8 1 264 2482 2743 Synchytrium decipiens isolate AFTOL-ID 634 28S ribosomal RNA gene, partial sequence blastn 17324 303 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium decipiens
13211052 13211052 PRJNA493244_P_NODE_654731_length_600_cov_1.897959_g632746_i0 PRJNA493244 654731 600 1.897959 11.387754 Gorgonomyces haynaldii 382530 Fungi Fungi 196 3.48e-57   NR KAI8905868.1 382530 g632746 i0 55.7 0.96 192 53 96 1 577 2 250 409 KAI8905868.1 pyridoxal phosphate-dependent transferase [Gorgonomyces haynaldii] diamond 576 196 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Gorgonomycetaceae Gorgonomyces Gorgonomyces haynaldii
20857432 20857432 PRJNA493244_P_NODE_1488477_length_245_cov_23.782609_g1465352_i0 PRJNA493244 1488477 245 23.782609 58.26739205 Orpinomyces sp. OUS1 301046 Fungi Fungi 97.1 1.01e-15   NTclustered gi|55859492|emb|AJ864475.1| 301046 g1465352 i0 78.107 47.0857142857143 169 25 66 10 1 161 4552 4716 Orpinomyces sp. OUS1 partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA, clone V5-1 blastn 11536 97.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Orpinomyces Orpinomyces sp. OUS1
20859171 20859171 PRJNA493244_P_NODE_758137_length_531_cov_5.944681_g735620_i0 PRJNA493244 758137 531 5.944681 31.56625611 Operculomyces laminatus 382552 Fungi Fungi 176 2.96e-39   NTclustered gi|1866582516|gb|MT730691.1| 382552 g735620 i0 85.227 26.6497175141243 176 21 33 2 22 197 3791 3961 Operculomyces laminatus isolate JEL0223 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14151 176 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Operculomyces Operculomyces laminatus
24051948 24051948 PRJNA493244_P_NODE_213959_length_1148_cov_6.751610_g201652_i0 PRJNA493244 213959 1148 6.75161 77.5084828 Fungi 4751 Fungi Fungi 103 9.52e-20   NR KAI8836345.1 64509 g201652 i0 36.2 5.02003484320557 188 28 49.1 2 566 3 1921 2016 KAI8836345.1 armadillo-type protein [Chytridium lagenaria] diamond 5763 104 0.990384615384615 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria
25326461 25326461 PRJNA493244_P_NODE_914240_length_446_cov_14.597403_g891264_i0 PRJNA493244 914240 446 14.597403 65.10441738 Fungi 4751 Fungi Fungi 120 5.02e-32   NR KAJ3145263.1 109894 g891264 i0 57.1 14.7040358744395 112 46 74.7 2 393 61 14 124 KAJ3145263.1 60S ribosomal protein L34 [Geranomyces variabilis] diamond 6558 120 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
26680809 26680809 PRJNA493244_P_NODE_244081_length_1082_cov_9.539667_g230629_i0 PRJNA493244 244081 1082 9.539667 103.21919694 Chytridiomycetes 451435 Fungi Fungi 134 1.0299999999999998e-31   NR KAI9001685.1 109897 g230629 i0 29.4 2.89463955637708 343 203 84.8 8 93 1010 38 378 KAI9001685.1 hypothetical protein BC832DRAFT_593977 [Gaertneriomyces semiglobifer] diamond 3132 135 0.992592592592593 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
26696534 26696534 PRJNA493244_P_NODE_514841_length_714_cov_16.269525_g494462_i0 PRJNA493244 514841 714 16.269525 116.1644085 Borealophlyctis nickersoniae 2735257 Fungi Fungi 80.9 3.99e-14   NR KAJ3264322.1 2735257 g494462 i0 59.1 0.277310924369748 66 21 27.7 2 457 654 91 150 KAJ3264322.1 hypothetical protein HK104_006491, partial [Borealophlyctis nickersoniae] diamond 198 80.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Borealophlyctidaceae Borealophlyctis Borealophlyctis nickersoniae
26791760 26791760 PRJNA493244_P_NODE_971841_length_419_cov_4.083799_g948777_i0 PRJNA493244 971841 419 4.083799 17.11111781 Zopfochytrium polystomum 2211651 Fungi Fungi 154 3.36e-45   NR KAI9362459.1 2211651 g948777 i0 58.9 3.65871121718377 129 53 92.4 0 32 418 1 129 KAI9362459.1 ribosomal protein L32e [Zopfochytrium polystomum] diamond 1533 154 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Zopfochytrium Zopfochytrium polystomum
26949803 26949803 PRJNA493244_P_NODE_737082_length_544_cov_6.770186_g714642_i0 PRJNA493244 737082 544 6.770186 36.82981184 Cladochytrium replicatum 109936 Fungi Fungi 55.5 2.48e-5   NR KAI8802972.1 109936 g714642 i0 55.8 0.485294117647059 43 19 23.7 0 212 340 360 402 KAI8802972.1 regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II [Cladochytrium replicatum] diamond 264 55.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
28024123 28024123 PRJNA493244_P_NODE_601785_length_639_cov_7.060554_g580233_i0 PRJNA493244 601785 639 7.060554 45.11694006 Chytridium lagenaria 64509 Fungi Fungi 120 5.639999999999999e-31   NR KAI8847197.1 64509 g580233 i0 49.6 0.624413145539906 133 67 62.4 0 483 85 3 135 KAI8847197.1 Rpl14 protein [Chytridium lagenaria] diamond 399 120 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria
28087070 28087070 PRJNA493244_P_NODE_645225_length_606_cov_7.673394_g623308_i0 PRJNA493244 645225 606 7.673394 46.50076764 Hyaloraphidium curvatum 82268 Fungi Fungi 96.3 6.21e-20   NR KAI9000420.1 82268 g623308 i0 56.7 0.445544554455446 90 32 41.1 2 585 337 136 225 KAI9000420.1 mitochondrial carrier domain-containing protein [Hyaloraphidium curvatum] diamond 270 96.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
29728721 29728721 PRJNA493244_P_NODE_1059330_length_382_cov_1.059190_g1036214_i0 PRJNA493244 1059330 382 1.05919 4.0461058 Nowakowskiella sp. JEL 2012159 Fungi Fungi 76.6 2.44e-13   NR KAJ1537229.1 2732417 g1036214 i0 39.8 0.887434554973822 113 57 88.7 2 342 4 217 318 KAJ1537229.1 Krev interaction trapped protein 1 [Nowakowskiella sp. JEL0078] diamond 339 76.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JEL0078
30202616 30202616 PRJNA493244_P_NODE_894252_length_456_cov_6.951899_g871299_i0 PRJNA493244 894252 456 6.951899 31.70065944 Cladochytrium replicatum 109936 Fungi Fungi 82 1.05e-16   NR KAI8807039.1 109936 g871299 i0 44 3.11184210526316 116 61 76.3 2 419 72 1 112 KAI8807039.1 60S ribosomal protein L28 [Cladochytrium replicatum] diamond 1419 82 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
30282371 30282371 PRJNA493244_P_NODE_1733092_length_196_cov_7.585185_g1709967_i0 PRJNA493244 1733092 196 7.585185 14.8669626 Fungi 4751 Fungi Fungi 49.7 7.03e-5   NR TPX60041.1 109895 g1709967 i0 46.2 3.38265306122449 52 24 79.6 2 158 3 473 520 TPX60041.1 hypothetical protein PhCBS80983_g02066 [Powellomyces hirtus] diamond 663 50.1 0.992015968063872 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
30329759 30329759 PRJNA493244_P_NODE_660552_length_595_cov_8.955056_g638528_i0 PRJNA493244 660552 595 8.955056 53.2825832 Entophlyctis luteolus 109932 Fungi Fungi 80.1 5.78e-14   NR KAJ3347275.1 109932 g638528 i0 34.2 0.574789915966387 114 73 57 2 560 222 183 295 KAJ3347275.1 hypothetical protein HDU83_002193 [Entophlyctis luteolus] diamond 342 80.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus
30361315 30361315 PRJNA493244_P_NODE_745272_length_539_cov_5.552301_g722801_i0 PRJNA493244 745272 539 5.552301 29.92690239 Blyttiomyces sp. JEL 2750429 Fungi Fungi 177 1.79e-53   NR KAJ3329793.1 2724214 g722801 i0 82.2 1.19109461966605 107 19 59.6 0 16 336 63 169 KAJ3329793.1 60S ribosomal protein L18 [Blyttiomyces sp. JEL0837] diamond 642 177 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces sp. JEL0837
30392893 30392893 PRJNA493244_P_NODE_423513_length_809_cov_10.860963_g404802_i0 PRJNA493244 423513 809 10.860963 87.86519067 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 208 1.44e-58   NR KAH9253362.1 1357716 g404802 i0 47.5 1.60197775030902 244 110 83.8 4 788 111 430 673 KAH9253362.1 hypothetical protein BASA81_008713 [Batrachochytrium salamandrivorans] diamond 1296 208 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
30550321 30550321 PRJNA493244_P_NODE_523433_length_706_cov_21.762791_g502925_i0 PRJNA493244 523433 706 21.762791 153.64530446 Polychytrium aggregatum 110093 Fungi Fungi 91.3 1.98e-17   NR XP_052965065.1 110093 g502925 i0 33.8 0.590651558073654 139 88 58.2 2 597 187 27 163 XP_052965065.1 uncharacterized protein BJ171DRAFT_157625 [Polychytrium aggregatum] diamond 417 91.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
31103340 31103340 PRJNA493244_P_NODE_568015_length_667_cov_4.905941_g546845_i0 PRJNA493244 568015 667 4.905941 32.72262647 Eukaryota 2759 Fungi Fungi 149 8.02e-41   NR KAJ3038342.1 64517 g546845 i0 55.6 1.97451274362819 108 47 48.6 1 62 385 28 134 KAJ3038342.1 hypothetical protein HDV00_000763 [Rhizophlyctis rosea] diamond 1317 150 0.993333333333333 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
31134752 31134752 PRJNA493244_P_NODE_490775_length_738_cov_1.732644_g470792_i0 PRJNA493244 490775 738 1.732644 12.78691272 root 1 Root_unresolved Root_unresolved 55.1 9.02e-5   NR XP_052961462.1 110093 g470792 i0 27.1 2.57317073170732 166 102 62.6 5 462 1 35 193 XP_052961462.1 uncharacterized protein BJ171DRAFT_575671 [Polychytrium aggregatum] diamond 1899 55.5 0.992792792792793 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
31213483 31213483 PRJNA493244_P_NODE_1659675_length_209_cov_0.864865_g1636550_i0 PRJNA493244 1659675 209 0.864865 1.80756785 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 45.8 0.00196   NR KAH9260768.1 1357716 g1636550 i0 47.6 0.602870813397129 42 21 58.9 1 125 3 255 296 KAH9260768.1 hypothetical protein BASA81_001235 [Batrachochytrium salamandrivorans] diamond 126 45.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
31308728 31308728 PRJNA493244_P_NODE_1488755_length_245_cov_4.190217_g1465630_i0 PRJNA493244 1488755 245 4.190217 10.26603165 Globomyces pollinis-pini 382532 Fungi Fungi 57 5.39e-8   NR KAI8902462.1 382532 g1465630 i0 55.3 0.575510204081633 47 21 57.6 0 218 78 87 133 KAI8902462.1 ribosomal protein L14-domain-containing protein [Globomyces pollinis-pini] diamond 141 57 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Globomycetaceae Globomyces Globomyces pollinis-pini
31435209 31435209 PRJNA493244_P_NODE_1533296_length_235_cov_1.844828_g1510171_i0 PRJNA493244 1533296 235 1.844828 4.3353458 Rhizophlyctis rosea 64517 Fungi Fungi 49.7 1.18e-4   NR KAJ3040736.1 64517 g1510171 i0 71.4 2.50212765957447 28 8 35.7 0 231 148 391 418 KAJ3040736.1 hypothetical protein HDV00_010492 [Rhizophlyctis rosea] diamond 588 49.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
31783093 31783093 PRJNA493244_P_NODE_748997_length_537_cov_3.029412_g726514_i0 PRJNA493244 748997 537 3.029412 16.26794244 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 99.4 1.58e-20   NR KAH9261246.1 1357716 g726514 i0 30.8 1.73184357541899 169 108 91.6 2 11 502 415 579 KAH9261246.1 hypothetical protein BASA81_000950 [Batrachochytrium salamandrivorans] diamond 930 99.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
32036332 32036332 PRJNA493244_P_NODE_664738_length_592_cov_15.037665_g642691_i0 PRJNA493244 664738 592 15.037665 89.0229768 Boothiomyces sp. JEL 2170262 Fungi Fungi 91.7 7.52e-18   NR KAJ3323500.1 2724215 g642691 i0 47.6 0.415540540540541 82 43 41.6 0 118 363 327 408 KAJ3323500.1 hypothetical protein HDV06_001777 [Boothiomyces sp. JEL0866] diamond 246 91.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Terramycetaceae Boothiomyces Boothiomyces sp. JEL0866
32841894 32841894 PRJNA493244_P_NODE_1439640_length_258_cov_1.269036_g1416515_i0 PRJNA493244 1439640 258 1.269036 3.27411288 Fungi 4751 Fungi Fungi 102 4.63e-23   NR KAJ3054521.1 64517 g1416515 i0 58.8 3.93023255813953 85 34 97.7 1 6 257 2615 2699 KAJ3054521.1 hypothetical protein HK097_001596, partial [Rhizophlyctis rosea] diamond 1014 102 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;