RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA493244" and tax_phylum = "Candidatus Blackallbacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Blackallbacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
455310 455310 PRJNA493244_P_NODE_1276741_length_304_cov_1.567901_g1253617_i0 PRJNA493244 1276741 304 1.567901 4.76641904 bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_5 2014262 Bacteria Bacteria 145 3.1799999999999992e-43   NR PIQ28281.1 2014262 g1253617 i0 85.4 0.809210526315789 82 12 80.9 0 2 247 4 85 PIQ28281.1 MAG: 50S ribosomal protein L27 [bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26] diamond 246 145 1 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26
32605667 32605667 PRJNA493244_P_NODE_1588380_length_223_cov_1.530864_g1565255_i0 PRJNA493244 1588380 223 1.530864 3.41382672 bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_5 2014262 Bacteria Bacteria 61.2 8.72e-9   NR PIQ23983.1 2014262 g1565255 i0 43.5 0.928251121076233 69 39 92.8 0 5 211 9 77 PIQ23983.1 MAG: hypothetical protein COW64_21140 [bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26] diamond 207 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;