RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA493244", tax_kingdom = "Thermotogati" and tax_phylum = "Thermotogota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermotogota · 12 ✖

tax_kingdom 1

  • Thermotogati · 12 ✖

bioproject 1

  • PRJNA493244 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1729616 1729616 PRJNA493244_P_NODE_1066982_length_378_cov_5.675079_g1043865_i0 PRJNA493244 1066982 378 5.675079 21.45179862 Thermotoga profunda 1508420 Bacteria Bacteria 134 1.25e-26   NTclustered gi|597439398|dbj|AP014510.1| 1408160 g1043865 i0 91 23.5449735449735 100 8 26 1 123 222 2163821 2163723 Thermotoga profunda AZM34c06 DNA, complete genome blastn 8900 134 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Thermotoga Thermotoga profunda
13853416 13853416 PRJNA493244_P_NODE_1464271_length_251_cov_3.363158_g1441146_i0 PRJNA493244 1464271 251 3.363158 8.44152658 Bacteria 2 Bacteria Bacteria 453 5.34e-123   NTclustered gi|2793119032|gb|CP126501.1| 44754 g1441146 i0 99.203 30 251 2 100 0 1 251 769975 770225 Fervidobacterium gondwanense strain CBS-13020 chromosome, complete genome blastn 7530 453 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium gondwanense
19581535 19581535 PRJNA493244_P_NODE_1436636_length_258_cov_7.791878_g1413511_i0 PRJNA493244 1436636 258 7.791878 20.10304524 Fervidobacterium nodosum 2424 Bacteria Bacteria 414 2.5999999999999995e-111   NTclustered gi|154152641|gb|CP000771.1| 381764 g1413511 i0 99.13 0.891472868217054 230 2 89 0 19 248 680374 680603 Fervidobacterium nodosum Rt17-B1, complete genome blastn 230 414 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium nodosum
26886831 26886831 PRJNA493244_P_NODE_1559401_length_229_cov_2.214286_g1536276_i0 PRJNA493244 1559401 229 2.214286 5.07071494 Fervidobacterium sp. 1871331 Bacteria Bacteria 159 4.19e-45   NR MEN6515317.1 1871331 g1536276 i0 98.7 3.9825327510917 76 1 99.6 0 2 229 169 244 MEN6515317.1 ABC transporter substrate-binding protein [Fervidobacterium sp.] diamond 912 159 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
27060795 27060795 PRJNA493244_P_NODE_1441902_length_257_cov_1.959184_g1418777_i0 PRJNA493244 1441902 257 1.959184 5.03510288 Thermotogales 2419 Bacteria Bacteria 160 2.2799999999999993e-43   NR HRD21027.1 1871331 g1418777 i0 98.8 2.83657587548638 81 0 93.4 1 241 2 786 866 HRD21027.1 hypothetical protein [Fervidobacterium sp.] diamond 729 160 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
27518864 27518864 PRJNA493244_P_NODE_713423_length_560_cov_1.801603_g691089_i0 PRJNA493244 713423 560 1.801603 10.0889768 Fervidobacterium sp. 1871331 Bacteria Bacteria 175 9.66e-50   NR MDM7320303.1 1871331 g691089 i0 81.2 0.541071428571429 101 19 54.1 0 245 547 17 117 MDM7320303.1 DEAD/DEAH box helicase [Fervidobacterium sp.] diamond 303 175 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
27992598 27992598 PRJNA493244_P_NODE_890165_length_458_cov_11.768262_g867224_i0 PRJNA493244 890165 458 11.768262 53.89863996 Fervidobacterium sp. 1871331 Bacteria Bacteria 103 1.18e-22   NR HQQ18382.1 1871331 g867224 i0 72.5 0.524017467248908 80 22 52.4 0 447 208 435 514 HQQ18382.1 ATP-binding cassette domain-containing protein [Fervidobacterium sp.] diamond 240 103 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
28434519 28434519 PRJNA493244_P_NODE_1699586_length_204_cov_0.895105_g1676461_i0 PRJNA493244 1699586 204 0.895105 1.8260142 Fervidobacterium sp. 1871331 Bacteria Bacteria 52.8 2.79e-6   NR MDM7320314.1 1871331 g1676461 i0 80.8 0.382352941176471 26 5 38.2 0 80 3 14 39 MDM7320314.1 hypothetical protein [Fervidobacterium sp.] diamond 78 52.8 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
28750212 28750212 PRJNA493244_P_NODE_1583927_length_224_cov_1.441718_g1560802_i0 PRJNA493244 1583927 224 1.441718 3.22944832 Fervidobacterium sp. 1871331 Bacteria Bacteria 130 1.02e-34   NR MDM7321177.1 1871331 g1560802 i0 89.9 0.924107142857143 69 7 92.4 0 18 224 291 359 MDM7321177.1 hypothetical protein [Fervidobacterium sp.] diamond 207 130 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
30202596 30202596 PRJNA493244_P_NODE_1587772_length_223_cov_1.580247_g1564647_i0 PRJNA493244 1587772 223 1.580247 3.52395081 Fervidobacterium sp. 1871331 Bacteria Bacteria 101 2.86e-24   NR MDM7321175.1 1871331 g1564647 i0 86.4 0.79372197309417 59 8 79.4 0 179 3 109 167 MDM7321175.1 hypothetical protein [Fervidobacterium sp.] diamond 177 101 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
30518801 30518801 PRJNA493244_P_NODE_1709453_length_203_cov_0.901408_g1686328_i0 PRJNA493244 1709453 203 0.901408 1.82985824 Fervidobacterium sp. 1871331 Bacteria Bacteria 122 8.2e-34   NR MDM7321179.1 1871331 g1686328 i0 86.8 1.00492610837438 68 8 99 1 3 203 45 112 MDM7321179.1 hypothetical protein [Fervidobacterium sp.] diamond 204 122 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
31846406 31846406 PRJNA493244_P_NODE_1747177_length_186_cov_5.288000_g1724052_i0 PRJNA493244 1747177 186 5.288 9.83568 Fervidobacterium sp. 1871331 Bacteria Bacteria 103 1.4500000000000002e-26   NR MDM7320281.1 1871331 g1724052 i0 88.1 0.951612903225806 59 7 95.2 0 10 186 1 59 MDM7320281.1 hypothetical protein [Fervidobacterium sp.] diamond 177 103 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;