RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA493244", tax_kingdom = "Promethearchaeati" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

tax_kingdom 1

  • Promethearchaeati · 1 ✖

bioproject 1

  • PRJNA493244 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32447908 32447908 PRJNA493244_P_NODE_1626279_length_215_cov_1.246753_g1603154_i0 PRJNA493244 1626279 215 1.246753 2.68051895 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 56.6 2.54e-8   NR TFG99957.1 2053491 g1603154 i0 46.7 0.837209302325581 60 31 82.3 1 38 214 11 70 TFG99957.1 MAG: hypothetical protein E4H12_00775 [Candidatus Thorarchaeota archaeon] diamond 180 56.6 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;