RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA493244", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA493244 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24682456 24682456 PRJNA493244_P_NODE_1743160_length_189_cov_14.554688_g1720035_i0 PRJNA493244 1743160 189 14.554688 27.50836032 Zebrafish influenza B-like virus RQ01 Viruses Viruses 76.8 9.62e-10   NTclustered gi|383213248|gb|CY112297.1| RQ01 g1720035 i0 94 26.3968253968254 50 3 26 0 102 151 1050 1099 Influenza A virus (A/Bilthoven/6022/1972(H3N2)) hemagglutinin (HA) gene, complete cds blastn 4989 76.8 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Zebrafish influenza B-like virus
29476099 29476099 PRJNA493244_P_NODE_1094110_length_367_cov_15.343137_g1070989_i0 PRJNA493244 1094110 367 15.343137 56.30931279 Penicillium discovirus 2185132 Viruses Viruses 44.7 0.0254   NR YP_010840287.1 2185132 g1070989 i0 51.2 0.35149863760218 43 21 35.1 0 5 133 223 265 YP_010840287.1 Nucleocapsid [Penicillium discovirus] diamond 129 44.7 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Discoviridae Orthodiscovirus Orthodiscovirus missouriense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;