RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA493244", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6835554 6835554 PRJNA493244_P_NODE_980446_length_415_cov_6.186441_g957374_i0 PRJNA493244 980446 415 6.186441 25.67373015 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 252 3.88e-82   NR PJF17712.1 1246581 g957374 i0 96 0.910843373493976 126 5 91.1 0 24 401 139 264 PJF17712.1 Ras-related C3 botulinum toxin substrate 1 [Paramicrosporidium saccamoebae] diamond 378 252 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
26727833 26727833 PRJNA493244_P_NODE_1123361_length_356_cov_3.471186_g1100239_i0 PRJNA493244 1123361 356 3.471186 12.35742216 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 70.9 3.28e-12   NR PJF16883.1 1246581 g1100239 i0 62.7 0.497191011235955 59 22 49.7 0 23 199 116 174 PJF16883.1 hypothetical protein PSACC_03316 [Paramicrosporidium saccamoebae] diamond 177 70.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;