RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493244", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA493244 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1729999 1729999 PRJNA493244_P_NODE_1241442_length_315_cov_1.881890_g1218318_i0 PRJNA493244 1241442 315 1.88189 5.9279535 Catenariaceae sp. 3036389 Fungi Fungi 562 1.1e-155   NTclustered gi|2468790846|gb|OQ702867.1| 3036389 g1218318 i0 98.742 73.1301587301587 318 1 100 3 1 315 2922 2605 Catenariaceae sp. isolate PSC066 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23036 562 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae   Catenariaceae sp.
26965815 26965815 PRJNA493244_P_NODE_1021222_length_397_cov_31.157738_g998120_i0 PRJNA493244 1021222 397 31.157738 123.69621986 Blastocladiales 4805 Fungi Fungi 102 7.44e-23   NR ORZ32215.1 765915 g998120 i0 61.4 4.39798488664987 83 32 62.7 0 23 271 299 381 ORZ32215.1 PCI domain-domain-containing protein [Catenaria anguillulae PL171] diamond 1746 103 0.990291262135922 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
30803143 30803143 PRJNA493244_P_NODE_840194_length_484_cov_7.262411_g817386_i0 PRJNA493244 840194 484 7.262411 35.15006924 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 226 7.929999999999999e-66   NR KAI9172952.1 1313167 g817386 i0 70.1 0.954545454545455 154 45 94.8 1 466 8 448 601 KAI9172952.1 Xenotropic and polytropic retrovirus receptor 1 [Blastocladiella emersonii ATCC 22665] diamond 462 226 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;