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contig_metadata

12 rows where bioproject = "PRJNA493244", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 12 ✖

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA493244 · 12 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3006679 3006679 PRJNA493244_P_NODE_1523043_length_237_cov_10.267045_g1499918_i0 PRJNA493244 1523043 237 10.267045 24.33289665 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 108 4.48e-19   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g1499918 i0 94.286 0.29535864978903 70 4 30 0 104 173 2861 2792 Rosculus vulgaris isolate CCA sequence blastn 70 108 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
5559741 5559741 PRJNA493244_P_NODE_1647405_length_210_cov_3.302013_g1624280_i0 PRJNA493244 1647405 210 3.302013 6.9342273 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 230 7.93e-56   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g1624280 i0 94.04 12.6285714285714 151 9 72 0 60 210 1582 1732 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 2652 230 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
6832836 6832836 PRJNA493244_P_NODE_1230546_length_318_cov_30.015564_g1207422_i0 PRJNA493244 1230546 318 30.015564 95.44949352 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 427 4.24e-115   NTclustered gi|2666517884|gb|PP258995.1| 2231160 g1207422 i0 94.035 41.9559748427673 285 12 88 4 38 318 1 284 Rosculus sp. strain SARCA10 small subunit ribosomal RNA gene, partial sequence blastn 13342 427 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
6833178 6833178 PRJNA493244_P_NODE_1388026_length_271_cov_5.366667_g1364901_i0 PRJNA493244 1388026 271 5.366667 14.54366757 Rosculus sp. VDelafont-2023a 3079709 SAR_Eukaryotes SAR_Eukaryotes 448 2.7099999999999996e-121   NTclustered gi|2589370978|gb|OR644361.1| 3079709 g1364901 i0 98.431 5.45018450184502 255 3 94 1 18 271 103 357 Rosculus sp. VDelafont-2023a isolate AJ1 small subunit ribosomal RNA gene, partial sequence blastn 1477 448 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp. VDelafont-2023a
7477791 7477791 PRJNA493244_P_NODE_1428786_length_260_cov_29.924623_g1405661_i0 PRJNA493244 1428786 260 29.924623 77.8040198 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 113 1.07e-20   NTclustered gi|88792586|gb|DQ386167.1| 188980 g1405661 i0 93.506 190.288461538462 77 4 29 1 182 257 2721 2797 Thaumatomastix sp. ATCC 50250 28S ribosomal RNA gene, partial sequence blastn 49475 113 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomastix Thaumatomastix sp. ATCC 50250
14483816 14483816 PRJNA493244_P_NODE_1230552_length_318_cov_25.673152_g1207428_i0 PRJNA493244 1230552 318 25.673152 81.64062336 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 584 2.38e-162   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1207428 i0 100 99.6006289308176 316 0 99 0 3 318 345 30 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 31673 584 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
15758951 15758951 PRJNA493244_P_NODE_1676593_length_206_cov_4.503448_g1653468_i0 PRJNA493244 1676593 206 4.503448 9.27710288 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 75 3.84e-9   NTclustered gi|290760486|gb|GQ144689.1| 361427 g1653468 i0 74.468 1.58252427184466 188 41 90 6 1 185 2292 2109 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 326 75 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
17035156 17035156 PRJNA493244_P_NODE_984894_length_413_cov_8.693182_g961820_i0 PRJNA493244 984894 413 8.693182 35.90284166 Chlorarachniophyceae sp. P314 467060 SAR_Eukaryotes SAR_Eukaryotes 143 2.29e-29   NTclustered gi|220983378|dbj|AB453014.1| 467060 g961820 i0 87.805 27.6150121065375 123 14 46 1 274 396 1892 1771 Chlorarachniophyceae sp. P314 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 11405 143 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae       Chlorarachniophyceae sp. P314
18307857 18307857 PRJNA493244_P_NODE_1660475_length_208_cov_2.945578_g1637350_i0 PRJNA493244 1660475 208 2.945578 6.12680224 Rosculus philanguis 2231163 SAR_Eukaryotes SAR_Eukaryotes 233 6.059999999999999e-57   NTclustered gi|1402550480|gb|MH488766.1| 2231163 g1637350 i0 89.305 8.20192307692308 187 18 89 2 2 186 440 254 Rosculus philanguis isolate HAS small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 1706 233 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus philanguis
18308432 18308432 PRJNA493244_P_NODE_31755_length_2114_cov_325.855334_g28889_i0 PRJNA493244 31755 2114 325.855334 6888.58176076 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 3687 0   NTclustered gi|1402550485|gb|MH488771.1| 2231170 g28889 i0 98.515 28.0591296121097 2087 25 99 5 5 2090 2085 4 Guttulinopsis rogosa isolate ATCC 50030 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 59317 3687 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
22777109 22777109 PRJNA493244_P_NODE_1747558_length_185_cov_5.201613_g1724433_i0 PRJNA493244 1747558 185 5.201613 9.62298405 Helkesimastix 310813 SAR_Eukaryotes SAR_Eukaryotes 99 2e-16   NTclustered gi|1002343660|gb|KU738538.1| 175275 g1724433 i0 88.75 4.34594594594595 80 9 43 0 17 96 25 104 Uncultured Cercozoa clone Cow/sheep_dung1 18S ribosomal RNA gene, partial sequence blastn 804 99 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
24681649 24681649 PRJNA493244_P_NODE_1444260_length_256_cov_36.707692_g1421135_i0 PRJNA493244 1444260 256 36.707692 93.97169152 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 183 7.909999999999997e-42   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g1421135 i0 82.273 57.34765625 220 32 86 3 20 239 3840 3628 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 14681 183 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;