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contig_metadata

10 rows where bioproject = "PRJNA493244", tax_clade = "Methanomada group" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 10 ✖

tax_clade 1

  • Methanomada group · 10 ✖

bioproject 1

  • PRJNA493244 · 10 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20856845 20856845 PRJNA493244_P_NODE_1249517_length_312_cov_4.079681_g1226393_i0 PRJNA493244 1249517 312 4.079681 12.72860472 Methanobacteriaceae archaeon 2099680 Archaea Archaea 83.6 4.11e-17   NR MDD2644230.1 2099680 g1226393 i0 50 0.75 78 39 75 0 291 58 114 191 MDD2644230.1 hypothetical protein [Methanobacteriaceae archaeon] diamond 234 83.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
27471748 27471748 PRJNA493244_P_NODE_803023_length_505_cov_2.966216_g780331_i0 PRJNA493244 803023 505 2.966216 14.9793908 root 1 Root_unresolved Root_unresolved 183 2.569999999999999e-55   NR MEM4196452.1 1884223 g780331 i0 55.5 8.37623762376238 155 66 92.1 1 479 15 2 153 MEM4196452.1 UDP-glucose 4-epimerase GalE [Methanothermobacter sp.] diamond 4230 183 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter sp.
28071445 28071445 PRJNA493244_P_NODE_477285_length_751_cov_5.163768_g457533_i0 PRJNA493244 477285 751 5.163768 38.77989768 root 1 Root_unresolved Root_unresolved 238 6.259999999999999e-72   NR MBO7212712.1 66852 g457533 i0 80.4 2.83621837549933 143 28 57.1 0 3 431 258 400 MBO7212712.1 hypothetical protein [Methanobrevibacter sp.] diamond 2130 238 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29113579 29113579 PRJNA493244_P_NODE_1454988_length_254_cov_1.326425_g1431863_i0 PRJNA493244 1454988 254 1.326425 3.3691195 root 1 Root_unresolved Root_unresolved 155 2.77e-43   NR MBO7731637.1 66852 g1431863 i0 90.5 1.98425196850394 84 8 99.2 0 254 3 69 152 MBO7731637.1 hypothetical protein [Methanobrevibacter sp.] diamond 504 155 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29160906 29160906 PRJNA493244_P_NODE_1018069_length_399_cov_2.082840_g994969_i0 PRJNA493244 1018069 399 2.08284 8.3105316 Methanobrevibacter sp. 66852 Archaea Archaea 195 3.12e-57   NR MBO7212712.1 66852 g994969 i0 83.9 0.842105263157895 112 17 84.2 1 340 5 400 510 MBO7212712.1 hypothetical protein [Methanobrevibacter sp.] diamond 336 195 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29918628 29918628 PRJNA493244_P_NODE_1102391_length_364_cov_3.369637_g1079269_i0 PRJNA493244 1102391 364 3.369637 12.26547868 Methanobacterium sp. 2164 Archaea Archaea 231 1.2499999999999998e-73   NR HEY0196609.1 2164 g1079269 i0 93.3 0.989010989010989 120 8 98.9 0 362 3 177 296 HEY0196609.1 dihydroorotate dehydrogenase [Methanobacterium sp.] diamond 360 231 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
31087508 31087508 PRJNA493244_P_NODE_1480435_length_247_cov_4.069892_g1457310_i0 PRJNA493244 1480435 247 4.069892 10.05263324 Methanobrevibacter arboriphilus 39441 Archaea Archaea 93.2 7.16e-20   NR WP_281845037.1 39441 g1457310 i0 85.1 1.79757085020243 74 11 89.9 0 2 223 24 97 WP_281845037.1 pseudomurein-binding repeat-containing protein [Methanobrevibacter arboriphilus] diamond 444 93.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
32337307 32337307 PRJNA493244_P_NODE_1699139_length_204_cov_0.895105_g1676014_i0 PRJNA493244 1699139 204 0.895105 1.8260142 root 1 Root_unresolved Root_unresolved 55.1 9.93e-7   NR WP_400244387.1 2173 g1676014 i0 36.5 5.80882352941176 74 39 97.1 1 6 203 497 570 WP_400244387.1 two-component regulator propeller domain-containing protein [Methanobrevibacter smithii] diamond 1185 55.5 0.992792792792793 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
32731726 32731726 PRJNA493244_P_NODE_1653660_length_209_cov_1.729730_g1630535_i0 PRJNA493244 1653660 209 1.72973 3.6151357 Methanobacterium sp. PtaU1.Bin 2164 Archaea Archaea 112 8.67e-30   NR OPY23032.1 1811675 g1630535 i0 91.5 0.84688995215311 59 5 84.7 0 178 2 19 77 OPY23032.1 MAG: response regulator PleD [Methanobacterium sp. PtaU1.Bin097] diamond 177 112 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. PtaU1.Bin097
32778854 32778854 PRJNA493244_P_NODE_1729740_length_199_cov_2.144928_g1706615_i0 PRJNA493244 1729740 199 2.144928 4.26840672 root 1 Root_unresolved Root_unresolved 58.2 2.09e-9   NR MBO7209559.1 66852 g1706615 i0 58.8 2.05025125628141 34 14 51.3 0 103 2 6 39 MBO7209559.1 hypothetical protein [Methanobrevibacter sp.] diamond 408 58.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;