RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA493244", tax_clade = "Luna-1 subcluster" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bacillati · 2 ✖

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1730172 1730172 PRJNA493244_P_NODE_1317742_length_291_cov_4.121739_g1294618_i0 PRJNA493244 1317742 291 4.121739 11.99426049 Aquiluna borgnonia 2499157 Bacteria Bacteria 377 3.92e-100   NTclustered gi|1850312474|gb|CP054056.1| 2499157 g1294618 i0 94.332 169.549828178694 247 13 85 1 46 291 854870 854624 Aquiluna borgnonia strain 15G-AUS-rot chromosome, complete genome blastn 49339 377 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna borgnonia
25326276 25326276 PRJNA493244_P_NODE_1744640_length_188_cov_6.952756_g1721515_i0 PRJNA493244 1744640 188 6.952756 13.07118128 Rhodoluna 529883 Bacteria Bacteria 265 1.9000000000000001e-66   NTclustered gi|1666461687|gb|CP040509.1| 232537 g1721515 i0 94.706 145.574468085106 170 9 90 0 19 188 476578 476747 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 27368 265 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;