RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA493244", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29918648 29918648 PRJNA493244_P_NODE_1514211_length_239_cov_19.741573_g1491086_i0 PRJNA493244 1514211 239 19.741573 47.18235947 Prymnesium parvum 97485 Haptophyta other_Eukaryota 70.9 4.46e-12   NR KAL1503435.1 97485 g1491086 i0 50 0.753138075313807 60 30 75.3 0 23 202 487 546 KAL1503435.1 hypothetical protein AB1Y20_011923 [Prymnesium parvum] diamond 180 70.9 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
30234466 30234466 PRJNA493244_P_NODE_732732_length_547_cov_3.936214_g710305_i0 PRJNA493244 732732 547 3.936214 21.53109058 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 82 1.18e-14   NR KAG8460774.1 2081491 g710305 i0 33.1 0.926873857404022 169 99 85 3 531 67 214 382 KAG8460774.1 hypothetical protein KFE25_010829 [Diacronema lutheri] diamond 507 82 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;