RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA493244", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA493244 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14484508 14484508 PRJNA493244_P_NODE_1513092_length_240_cov_1.363128_g1489967_i0 PRJNA493244 1513092 240 1.363128 3.2715072 uncultured Fibrobacteria bacterium 1758207 Bacteria Bacteria 63.9 9.97e-6   NTclustered gi|2874253984|emb|OY970309.1| 1758207 g1489967 i0 97.297 0.154166666666667 37 1 15 0 180 216 1139962 1139998 MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 blastn 37 63.9 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       uncultured Fibrobacteria bacterium
32036319 32036319 PRJNA493244_P_NODE_1613778_length_217_cov_2.980769_g1590653_i0 PRJNA493244 1613778 217 2.980769 6.46826873 Chitinispirillales bacterium 2872172 Bacteria Bacteria 46.6 4.03e-4   NR MDR0303292.1 2872172 g1590653 i0 56.3 0.884792626728111 32 14 44.2 0 175 80 40 71 MDR0303292.1 hypothetical protein [Chitinispirillales bacterium] diamond 192 46.6 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales     Chitinispirillales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;