RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA493244", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA493244 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4282734 4282734 PRJNA493244_P_NODE_1458024_length_253_cov_1.661458_g1434899_i0 PRJNA493244 1458024 253 1.661458 4.20348874 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 52.8 0.023   NTclustered gi|2621704217|emb|OY761611.1| 2447898 g1434899 i0 96.774 0.122529644268775 31 1 12 0 201 231 3027249 3027219 MAG: Candidatus Kapabacteria bacterium isolate 963550f5-4d88-4eb0-99f7-25ebda648600 genome assembly, chromosome: 1 blastn 31 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29602347 29602347 PRJNA493244_P_NODE_1311550_length_293_cov_2.758621_g1288426_i0 PRJNA493244 1311550 293 2.758621 8.08275953 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 83.6 2.39e-16   NR MBL8005601.1 2447898 g1288426 i0 71.7 0.614334470989761 60 17 61.4 0 94 273 1 60 MBL8005601.1 alginate export family protein [Candidatus Kapaibacterium sp.] diamond 180 83.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30929534 30929534 PRJNA493244_P_NODE_1529814_length_236_cov_1.462857_g1506689_i0 PRJNA493244 1529814 236 1.462857 3.45234252 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 40.8 0.0238   NR MFI5263913.1 2447898 g1506689 i0 50 0.483050847457627 38 19 48.3 0 236 123 29 66 MFI5263913.1 phosphate ABC transporter substrate-binding protein PstS [Candidatus Kapaibacterium sp.] diamond 114 40.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;